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CG3081 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31395, updated on 4-Apr-2024

Summary

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Official Symbol
CG3081provided by FlyBase
Primary source
FLYBASE:FBgn0025613
Locus tag
Dmel_CG3081
See related
AllianceGenome:FB:FBgn0025613
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG3081; EG:84H4.4
Summary
Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
4C10-4C10; 1-8 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4639259..4643987, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4533292..4538020, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Alstrom syndrome 1a Neighboring gene partner of numb Neighboring gene uncharacterized protein Neighboring gene Helix loop helix protein 4C Neighboring gene mitochondrial ribosomal protein L30 Neighboring gene torsin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG3081-PA
CG3081-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4639259..4643987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001297936.1 → NP_001284865.1  uncharacterized protein Dmel_CG3081, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284865.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X2JCJ0
    Conserved Domains (1) summary
    pfam16071
    Location:392 → 456
    DUF4812; Domain of unknown function (DUF4812)

  2. NM_131948.2 → NP_572176.2  uncharacterized protein Dmel_CG3081, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572176.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9W4I6
    Related
    FBpp0070661
    Conserved Domains (1) summary
    pfam16071
    Location:518 → 582
    DUF4812; Domain of unknown function (DUF4812)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O77280 O77280
Q9W4I6 Q9W4I6
X2JCJ0 X2JCJ0

Gene LinkOut

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