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    sta stubarista [ Drosophila melanogaster ]

    Gene ID: 31106, updated on 10-May-2012
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    Summary

    Official Symbol
    staprovided by Flybase
    Official Full Name
    stubaristaprovided by Flybase
    Primary source
    FLYBASE:FBgn0003517
    Locus tag
    Dmel_CG14792
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    37LRP/p40; anon-EST:Liang-2.56; CG14792; clone 2.56; Dmel\CG14792; EG:80H7.6; k14; l(1)2Af; l(1)G0130; l(1)G0448; Lam-r; P40; Rp40; RpSA; Sa; STA
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    Genomic context

    Location :
    2B1-2B1
    Sequence :
    Chromosome: X; NC_004354.3 (1375830..1377446, complement)
    See sta in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene meiotic 38 Neighboring gene ncRNA Neighboring gene CG14782 gene product from transcript CG14782-RA Neighboring gene ncRNA Neighboring gene NMDA receptor 2 Neighboring gene CG14795 gene product from transcript CG14795-RB

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573.
    2. Global analysis of the relationship between JIL-1 kinase and transcription. Regnard C, et al. PLoS Genet, 2011 Mar. PMID 21423663.
    3. False negative rates in Drosophila cell-based RNAi screens: a case study. Booker M, et al. BMC Genomics, 2011 Jan 20. PMID 21251254.
    4. Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. Blanco E, et al. BMC Dev Biol, 2010 Sep 2. PMID 20813047.
    5. The TCT motif, a key component of an RNA polymerase II transcription system for the translational machinery. Parry TJ, et al. Genes Dev, 2010 Sep 15. PMID 20801935.

    See all (48) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:57663 BioGRID:65582 CG10566    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:63269 CG3085    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:65149 CG4169    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:57663 BioGRID:66449 CG4511    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:62692 CG6459    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:68567 CycG    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:77555 LpR1    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:66171 Poxm    BioGRID  PubMed Two-hybrid 
    BioGRID:57663 BioGRID:59710 RpS21    BioGRID  PubMed Phenotypic Enhancement 
    BioGRID:57663 BioGRID:67033 ss    BioGRID  PubMed Phenotypic Enhancement 
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    General gene information

    Homology

    • Homologs of the sta gene: The sta gene is conserved in human, , dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, A.thaliana, rice, and P.falciparum.

    Pathways from BioSystems

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    structural constituent of ribosome NAS
    Non-traceable Author Statement
    more info
    		  
    Process Evidence Code Pubs
    mitotic spindle elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    mitotic spindle organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    translation NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    cytosolic small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    cytosolic small ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    		  
    lipid particle IDA
    Inferred from Direct Assay
    more info
    		  
    microtubule associated complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    ribosome NAS
    Non-traceable Author Statement
    more info
    		  
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    General protein information

    Preferred Names
    CG14792 gene product from transcript CG14792-RB
    Names
    CG14792-PA
    CG14792-PB
    CG14792-PD
    Laminin-receptor
    laminin receptor
    ribosomal protein SA
    sta-PA
    sta-PB
    sta-PD
    stubarista
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      1375830..1377446, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166889.2 → NP_726744.1  stubarista, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P38979
      Related
      FBpp0070278, FBtr0070290
      Conserved Domains (1) summary
      cd01425
      Location:18 – 184
      Blast Score: 533
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...

    2. NM_057402.4 → NP_476750.1  stubarista, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P38979
      Related
      FBpp0070277, FBtr0070289
      Conserved Domains (1) summary
      cd01425
      Location:18 – 184
      Blast Score: 533
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...

    3. NM_166890.2 → NP_726745.2  stubarista, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P38979
      Related
      FBpp0070279, FBtr0070291
      Conserved Domains (1) summary
      cd01425
      Location:61 – 227
      Blast Score: 535
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic M90422.1 AAA28741.1
    genomic AE014298.4 AAN09049.1
    mRNA BT029094.1 ABJ17027.1
    genomic AL031027.1 CAA19839.1
    mRNA AY118899.1 AAM50759.1
    genomic AE014298.4 AAF45638.2
    genomic AE014298.4 AAN09050.2
    Protein Accession Links
    GenPept Link UniProtKB Link
    T13602.1 GenPept
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    Additional Links

    Gene LinkOut

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