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    CG17778 [ Drosophila melanogaster ]

    Gene ID: 30996, updated on 9-May-2012
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    Summary

    Official Symbol
    CG17778provided by Flybase
    Primary source
    FLYBASE:FBgn0023534
    Locus tag
    Dmel_CG17778
    Gene type
    protein coding
    RNA name
    CG17778
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH02374; Dmel\CG17778; EG:171D11.5
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    Genomic context

    Location :
    1B5-1B5
    Sequence :
    Chromosome: X; NC_004354.3 (388933..390402)
    See CG17778 in Epigenomics, MapViewer

    Chromosome X - NC_004354.3Genomic Context describing neighboring genes Neighboring gene CG3156 gene product from transcript CG3156-RA Neighboring gene CG17896 gene product from transcript CG17896-RB Neighboring gene silver Neighboring gene arginase Neighboring gene embryonic lethal abnormal vision

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966.
    2. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    3. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:57567 BioGRID:61047 BicD    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:59020 CG12433    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:72567 CG12589    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:60579 CG14071    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:59415 CG17599    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:67173 CG17803    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:63022 CG3295    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:59083 CG6398    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:64569 CG8065    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:60757 CG9426    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:65187 CG9951    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:59246 Grip84    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:65333 dysb    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:64676 pallidin    BioGRID  PubMed Two-hybrid 
    BioGRID:57567 BioGRID:75540 pen-2    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG17778 gene product from transcript CG17778-RA
    Names
    CG17778
    CG17778-PA
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.3

      Range
      388933..390402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130490.2 → NP_569846.2  CG17778 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MYW2
      Related
      FBpp0070079, FBtr0070080
      Conserved Domains (1) summary
      pfam07851
      Location:63 – 102
      Blast Score: 85
      TMPIT; TMPIT-like protein
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014298.4 AAF45512.2
    mRNA AY113555.1 AAM29560.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MYW2.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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