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Cbx8 chromobox 8 [ Mus musculus (house mouse) ]

Gene ID: 30951, updated on 8-May-2016
Official Symbol
Cbx8provided by MGI
Official Full Name
chromobox 8provided by MGI
Primary source
MGI:MGI:1353589
See related
Ensembl:ENSMUSG00000025578
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pc3
Orthologs
Location:
11; 11 E2
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (119038436..119040913, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (118899750..118902227, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 Neighboring gene predicted gene, 35829 Neighboring gene chromobox 2 Neighboring gene chromobox 4 Neighboring gene predicted gene, 39482

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
methylated histone binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
single-stranded RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
ubiquitin-protein transferase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
chromatin modification IEA
Inferred from Electronic Annotation
more info
 
chromatin silencing ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
histone ubiquitination IDA
Inferred from Direct Assay
more info
PubMed 
negative regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
positive regulation of DNA repair ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cell proliferation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of collagen biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
regulation of catalytic activity IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
PRC1 complex ISO
Inferred from Sequence Orthology
more info
 
PcG protein complex IDA
Inferred from Direct Assay
more info
PubMed 
PcG protein complex ISO
Inferred from Sequence Orthology
more info
 
heterochromatin IDA
Inferred from Direct Assay
more info
PubMed 
nuclear chromatin ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
ubiquitin ligase complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
chromobox protein homolog 8
Names
chromobox homolog 8
mPc3
polycomb 3 homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013926.1NP_038954.1  chromobox protein homolog 8

    See identical proteins and their annotated locations for NP_038954.1

    Status: PROVISIONAL

    Source sequence(s)
    AF180370
    Consensus CDS
    CCDS25709.1
    UniProtKB/Swiss-Prot
    Q9QXV1
    Related
    ENSMUSP00000026663, OTTMUSP00000004337, ENSMUST00000026663, OTTMUST00000008885
    Conserved Domains (1) summary
    cd00024
    Location:1060
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    119038436..119040913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    130782897..130785374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)