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    BPSL2277 lipoprotein releasing system transmembrane protein [ Burkholderia pseudomallei K96243 ]

    Gene ID: 3093214, updated on 5-Feb-2012
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    Summary

    Gene symbol
    BPSL2277
    Gene description
    lipoprotein releasing system transmembrane protein
    Locus tag
    BPSL2277
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Burkholderia pseudomallei K96243 (strain: K96243)
    Lineage
    Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group
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    Genomic context

    Sequence :
    Chromosome: 1; NC_006350.1 (2742870..2744123, complement)

    Chromosome 1 - NC_006350.1Genomic Context describing neighboring genes Neighboring gene TatD related DNase Neighboring gene lipoprotein releasing system ATP-binding protein Neighboring gene hypothetical protein Neighboring gene single-stranded-DNA-specific exonuclease

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei. Holden MT, et al. Proc Natl Acad Sci U S A, 2004 Sep 28. PMID 15377794.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    General gene information

    Pathways from BioSystems

    • ABC transporters, organism-specific biosystem (from KEGG)
      ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • ABC transporters, conserved biosystem (from KEGG)
      ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • Lipoprotein-releasing system, organism-specific biosystem (from KEGG)
      Lipoprotein-releasing system, organism-specific biosystemStructural complex; Environmental information processing; ABC-2 type and other transport systems

    Miscellaneous features

    • Loc: c2743325-2742894 Pfam match to entry PF02687 DUF214, Predicted permease , score 135.6, E-value 5.6e-38
    • Loc: c2744054-2743986, ~, c2743304-2743236, ~, c2743139-2743071, ~, c2742992-2742924 4 probable transmembrane helices predicted for BPSL2277 by TMHMM2.0 at aa 24-46, 274-296, 329-351 and 378-400
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    General protein information

    Names
    lipoprotein releasing system transmembrane protein
    YP_108873.1
    • Similar to Escherichia coli lipoprotein releasing system transmembrane protein LolE SWALL:LOLE_ECOLI (SWALL:P75958) (413 aa) fasta scores: E(): 1.3e-42, 34.54% id in 414 aa, and to Ralstonia solanacearum probable lipoprotein releasing system transmembrane rsc1117 or rs05757 SWALL:Q8Y0C7 (EMBL:AL646062) (416 aa) fasta scores: E(): 1.4e-112, 71.46% id in 417 aa
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006350.1

      Range
      2742870..2744123, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_108873.1 lipoprotein releasing system transmembrane protein [Burkholderia pseudomallei K96243]

      UniProtKB/TrEMBL
      Q63SP3
      Conserved Domains (3) summary
      TIGR02212
      Location:4 – 417
      Blast Score: 1173
      lolCE; lipoprotein releasing system, transmembrane protein, LolC/E family
      pfam12704
      Location:31 – 245
      Blast Score: 140
      MacB_PCD; MacB-like periplasmic core domain
      cl15850
      Location:276 – 410
      Blast Score: 151
      FtsX; FtsX-like permease family
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BX571965.1 CAH36280.1
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    Additional Links

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