These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001014023.1 → NP_001014045.1 tripartite motif-containing protein 5
Status: PROVISIONAL
- Source sequence(s)
-
BC078926
- UniProtKB/TrEMBL
-
Q6AYT1
- Related
- ENSRNOP00000023099, ENSRNOT00000023100
- Conserved Domains (4) summary
-
- cd00021
Location:96 – 132
Blast Score: 101
- BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
- cd00162
Location:14 – 59
Blast Score: 110
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
- smart00449
Location:350 – 507
Blast Score: 177
- SPRY; Domain in SPla and the RYanodine Receptor.
- pfam13923
Location:11 – 59
Blast Score: 114
- zf-C3HC4_2; Zinc finger, C3HC4 type (RING finger)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference Rnor_5.0 Primary Assembly
Genomic
-
NC_005100.3 Reference Rnor_5.0 Primary Assembly
- Range
- 175586830..175603800, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate Rn_Celera
Genomic
-
AC_000069.1 Alternate Rn_Celera
- Range
- 156710957..156727926, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)