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Nkd2 naked cuticle homolog 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 308068, updated on 26-May-2016
Official Symbol
Nkd2provided by RGD
Official Full Name
naked cuticle homolog 2provided by RGD
Primary source
RGD:1311459
See related
Ensembl:ENSRNOG00000016103
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Orthologs
Location:
1p11
Exon count:
13
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (32054412..32085416)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 1 NC_005100.3 (33482721..33509561)

Chromosome 1 - NC_005100.4Genomic Context describing neighboring genes Neighboring gene zinc finger, DHHC-type containing 11 Neighboring gene bromodomain containing 9 Neighboring gene thyroid hormone receptor interactor 13 Neighboring gene solute carrier family 12 member 7 Neighboring gene solute carrier family 6 member 19

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Wnt Signaling Pathway and Pluripotency, organism-specific biosystem (from WikiPathways)
    Wnt Signaling Pathway and Pluripotency, organism-specific biosystemThis pathway was adapted from several resources and is designed to provide a theoretical frame-work for examining Wnt signaling and interacting components in the context of embryonic stem-cell pluri...
  • Wnt signaling pathway, organism-specific biosystem (from KEGG)
    Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
  • Wnt signaling pathway, conserved biosystem (from KEGG)
    Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
growth factor binding IEA
Inferred from Electronic Annotation
more info
 
growth factor binding ISO
Inferred from Sequence Orthology
more info
 
ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 
ubiquitin protein ligase binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
cell periphery ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic vesicle ISO
Inferred from Sequence Orthology
more info
 
lateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
colocalizes_with lateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
protein naked cuticle homolog 2
Names
naked cuticle 2 homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107454.1NP_001100924.1  protein naked cuticle homolog 2

    See identical proteins and their annotated locations for NP_001100924.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474002
    UniProtKB/TrEMBL
    D4A182
    Related
    ENSRNOP00000021898, ENSRNOT00000021898

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    32054412..32085416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008758692.1XP_008756914.1  

    See identical proteins and their annotated locations for XP_008756914.1

    UniProtKB/TrEMBL
    D4A182
  2. XM_008758693.1XP_008756915.1  

  3. XM_008758691.1XP_008756913.1  

Alternate Rn_Celera

Genomic

  1. AC_000069.1 Alternate Rn_Celera

    Range
    28092060..28118895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)