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    CFH complement factor H [ Homo sapiens (human) ]

    Gene ID: 3075, updated on 12-May-2013
    Official Symbol
    CFHprovided by HGNC
    Official Full Name
    complement factor Hprovided by HGNC
    Primary source
    HGNC:4883
    Locus tag
    RP1-177P10.1
    See related
    Ensembl:ENSG00000000971; HPRD:00601; MIM:134370; Vega:OTTHUMG00000035607
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FH; HF; HF1; HF2; HUS; FHL1; AHUS1; AMBP1; ARMD4; ARMS1; CFHL3
    Summary
    This gene is a member of the Regulator of Complement Activation (RCA) gene cluster and encodes a protein with twenty short consensus repeat (SCR) domains. This protein is secreted into the bloodstream and has an essential role in the regulation of complement activation, restricting this innate defense mechanism to microbial infections. Mutations in this gene have been associated with hemolytic-uremic syndrome (HUS) and chronic hypocomplementemic nephropathy. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Oct 2011]
    Location :
    1q32
    Sequence :
    Chromosome: 1; NC_000001.10 (196621008..196716634)

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim17-A-like Neighboring gene potassium channel, subfamily T, member 2 Neighboring gene microRNA 4735 Neighboring gene complement factor H-related 3 Neighboring gene complement factor H-related 1

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Atypical hemolytic-uremic syndrome 1

    Summary from GeneReviews: Atypical Hemolytic-Uremic Syndrome Go to GeneReviews

    Disease Characteristics
    Hemolytic-uremic syndrome (HUS) is characterized by hemolytic anemia, thrombocytopenia, and renal failure caused by platelet thrombi in the microcirculation of the kidney and other organs. Typical (acquired) HUS is triggered by infectious agents such as strains of E. coli (Stx-E. coli) that produce powerful Shiga-like exotoxins, whereas atypical HUS (aHUS) can be genetic, acquired, or idiopathic (of unknown cause). Onset of atypical HUS ranges from prenatal to adulthood. Individuals with genetic atypical HUS frequently experience relapse even after complete recovery following the presenting episode. Sixty percent of genetic aHUS progresses to end-stage renal disease (ESRD).
    Diagnosis Testing
    Atypical HUS is considered genetic when two or more members of the same family are affected by the disease at least six months apart and exposure to a common triggering infectious agent has been excluded, or when a disease-causing mutation(s) is identified in one of the nine genes in which mutations are known to be associated with aHUS, irrespective of familial history. The nine genes are: CFH (encoding complement factor H), accounting for an estimated 30% of aHUS; CD46 (MCP) (encoding membrane cofactor protein) accounting for approximately 12% of aHUS; CFI (encoding complement factor I), accounting for an estimated 5%-10% of aHUS; C3 (encoding the third component of complement C3) accounting for 5% of aHUS; rarely, CFB (encoding complement factor B); and THBD (encoding thrombomodulin) accounting for about 5% of aHUS. Deletions involving CFHR1 and CFHR3 or CFHR1 and CFHR4 account for 5%-15% of aHUS.
    Genetic Counseling
    Predisposition to atypical HUS (aHUS) is inherited in an autosomal recessive or autosomal dominant manner with incomplete penetrance. Rarely digenic inheritance and uniparental isodisomy are observed. Autosomal recessive inheritance: Heterozygotes (carriers) are usually asymptomatic; however, rarely carriers have developed aHUS in adulthood. At conception, each sib of an individual with autosomal recessive aHUS has a 25% chance of inheriting two disease-causing mutations, a 50% chance of inheriting one mutation and being a carrier, and a 25% chance of inheriting neither mutation. Autosomal dominant inheritance: Some individuals diagnosed with autosomal dominant aHUS have an affected parent or an affected close relative, but in the majority the family history is negative because of reduced penetrance of the disease-causing mutation in an asymptomatic parent, early death of a parent, late onset in a parent (or close relative), or a de novo mutation in the proband. Each child of an individual with autosomal dominant aHUS has a 50% chance of inheriting the mutation. In both genetic types, clinical severity and disease phenotype often differ among individuals with the same mutations; thus, age of onset and/or disease progression and outcome cannot be predicted. Prenatal diagnosis for pregnancies at increased risk is possible if the disease-associated mutation(s) has (have) been identified in the family.
    References

    Factor H deficiency

    Summary from GeneReviews: Dense Deposit Disease / Membranoproliferative Glomerulonephritis Type II Go to GeneReviews

    Disease Characteristics
    Dense deposit disease (DDD)/membranoproliferative glomerulonephritis type II (MPGNII) is characterized by onset of hematuria and/or proteinuria, acute nephritic syndrome, or nephrotic syndrome. It most frequently affects children between ages five and 15 years. Spontaneous remissions are uncommon and about 50% of affected individuals develop end-stage renal disease (ESRD) within ten years of diagnosis. DDD/MPGNII can be associated with acquired partial lipodystrophy (APL). Drusen, whitish-yellow deposits within Bruch's membrane of the retina often develop in the second decade of life; they initially have little impact on vision, but cause vision problems from subretinal neovascular membranes, macular detachment, and central serous retinopathy in about 10% of affected individuals.
    Diagnosis Testing
    The definitive diagnosis of DDD/MPGNII requires electron microscopy and immunofluorescence studies of a renal biopsy. Sequence variants in the genes CFH, CFHR5, C3, and LMNA have been implicated in the pathogenesis of DDD/MPGNII, a complex genetic disease that is rarely inherited in a simple Mendelian fashion.
    Genetic Counseling
    DDD/MPGNII is a complex genetic disease that is rarely inherited in a simple Mendelian fashion. Multiple affected persons within a single nuclear family are only reported occasionally; in these instances, parental consanguinity is common. In persons with DDD/MPGNII in whom two pathologic mutations can be identified in CFH, inheritance is autosomal recessive. However, in most persons with DDD/MPGNII, two pathologic mutations cannot be identified and risks to family members are not known.
    References

    NHGRI GWAS Catalog

    show more
    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env Inhibition of DAF or use of factor H depleted sera significantly increases C3 deposition on recombinant HIV-1 gp120 coated CD4 cells PubMed
    env Direct interaction of complement factor H with the C1 domain (amino acids 105-119) of HIV-1 gp120 is found in sera from AIDS patients PubMed
    Envelope transmembrane glycoprotein gp41 env Four areas in HIV-1 gp41 (aa 561-585, 587-605, 615-635, 651-675) interact with human factor H PubMed
    env Preincubation of HIV-1 gp41 with either factor H or properdin, and of HIV-1 gp120 with C3b or C4b affect the interaction between HIV-1 gp41 and gp120 PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    P08603 P35318 ADM    HPRD  PubMed  
    P08603 P01024 C3    HPRD  PubMed  
    P08603 Q03591 CFHR1    HPRD  PubMed  
    P08603 P05156 CFI    HPRD  PubMed  
    P08603 P02741 CRP    HPRD  PubMed  
    P08603 Q13316 DMP1    HPRD  PubMed  
    P08603 P11215 ITGAM    HPRD  PubMed  
    P08603 P26022 PTX3    HPRD  PubMed  
    P08603 P14151 SELL    HPRD  PubMed  
    P08603 P07996 THBS1    HPRD  PubMed  
    BioGRID:109324 BioGRID:106715 ALB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:109324 BioGRID:107179 C3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109324 BioGRID:107791 CRP    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109324 BioGRID:108347 EP300    BioGRID  PubMed Two-hybrid 
    BioGRID:109324 BioGRID:33985 GPM1    BioGRID  PubMed Far Western 
    BioGRID:109324 BioGRID:109142 GRB2    BioGRID  PubMed Two-hybrid 
    BioGRID:109324 BioGRID:32102 HEM12    BioGRID  PubMed Far Western 
    BioGRID:109324 BioGRID:33444 HIP1    BioGRID  PubMed Far Western 
    BioGRID:109324 BioGRID:32674 NCL1    BioGRID  PubMed Far Western 
    BioGRID:109324 BioGRID:112302 SELL    BioGRID  PubMed Reconstituted Complex 
    BioGRID:109324 BioGRID:110263 SMAD3    BioGRID  PubMed Two-hybrid 
    BioGRID:109324 BioGRID:113264 VDR    BioGRID  PubMed Two-hybrid 
    BioGRID:109324 BioGRID:124871 YTHDC1    BioGRID  PubMed Two-hybrid 
    BioGRID:109324 BioGRID:113498 ZBTB16    BioGRID  PubMed Two-hybrid 
    • Complement and coagulation cascades, organism-specific biosystem (from KEGG)
      Complement and coagulation cascades, organism-specific biosystemThe complement system is a proteolytic cascade in blood plasma and a mediator of innate immunity, a nonspecific defense mechanism against pathogens. There are three pathways of complement activation:...
    • Complement and coagulation cascades, conserved biosystem (from KEGG)
      Complement and coagulation cascades, conserved biosystemThe complement system is a proteolytic cascade in blood plasma and a mediator of innate immunity, a nonspecific defense mechanism against pathogens. There are three pathways of complement activation:...
    • Complement cascade, organism-specific biosystem (from REACTOME)
      Complement cascade, organism-specific biosystemThe complement system is a biochemical cascade, so named because it 'complements' the ability of antibodies to clear pathogens. It is part of the innate immune system. Complement system proteins circ...
    • Immune System, organism-specific biosystem (from REACTOME)
      Immune System, organism-specific biosystemHumans are exposed to millions of potential pathogens daily, through contact, ingestion, and inhalation. Our ability to avoid infection depends on the adaptive immune system and during the first crit...
    • Innate Immune System, organism-specific biosystem (from REACTOME)
      Innate Immune System, organism-specific biosystemInnate immunity encompases the nonspecific part of immunity tha are part of an individual's natural biologic makeup
    • Regulation of Complement cascade, organism-specific biosystem (from REACTOME)
      Regulation of Complement cascade, organism-specific biosystemTwo inherent features of complement activation make its regulation very important: 1. There is an inherent positive feedback loop because the product of C3 activation forms part of an enzyme that cau...
    • Staphylococcus aureus infection, organism-specific biosystem (from KEGG)
      Staphylococcus aureus infection, organism-specific biosystemStaphylococcus aureus can cause multiple forms of infections ranging from superficial skin infections to food poisoning and life-threatening infections. The organism has several ways to divert the ef...
    • Staphylococcus aureus infection, conserved biosystem (from KEGG)
      Staphylococcus aureus infection, conserved biosystemStaphylococcus aureus can cause multiple forms of infections ranging from superficial skin infections to food poisoning and life-threatening infections. The organism has several ways to divert the ef...

    Markers

    Homology

    Clone Names

    • MGC88246

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    heparan sulfate proteoglycan binding IDA
    Inferred from Direct Assay
    more info
     
    heparin binding IDA
    Inferred from Direct Assay
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    complement activation TAS
    Traceable Author Statement
    more info
    PubMed 
    complement activation, alternative pathway IEA
    Inferred from Electronic Annotation
    more info
     
    innate immune response TAS
    Traceable Author Statement
    more info
     
    regulation of complement activation TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    extracellular region TAS
    Traceable Author Statement
    more info
     
    extracellular space TAS
    Traceable Author Statement
    more info
    PubMed 
    Preferred Names
    complement factor H
    Names
    complement factor H
    beta-1H
    factor H
    factor H-like 1
    beta-1-H-globulin
    H factor 1 (complement)
    H factor 2 (complement)
    adrenomedullin binding protein
    complement factor H, isoform b
    age-related maculopathy susceptibility 1
    NP_000177.2
    NP_001014975.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007259.1 RefSeqGene

      Range
      4868..100494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics), LRG_47

    mRNA and Protein(s)

    1. NM_000186.3NP_000177.2  complement factor H isoform a precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
      Source sequence(s)
      AL049744, BC142699, BM842566, BP324193, Y00716
      Consensus CDS
      CCDS1385.1
      UniProtKB/Swiss-Prot
      P08603
      Related
      ENSP00000356399, OTTHUMP00000033598, ENST00000367429, OTTHUMT00000086412
      Conserved Domains (2) summary
      cd00033
      Location:146206
      Blast Score: 130
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      PHA02927
      Location:9891230
      Blast Score: 202
      PHA02927; secreted complement-binding protein; Provisional
    2. NM_001014975.2NP_001014975.1  complement factor H isoform b precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) utilizes an alternate terminal exon which results in an early stop codon. The resulting protein (isoform b, also known as the "factor H-like 1" or "FHL-1" isoform) has a distinct C-terminus and is shorter than isoform a.
      Source sequence(s)
      AL049744, BC073982, BM842566
      Consensus CDS
      CCDS53452.1
      UniProtKB/TrEMBL
      F8WDX4
      Related
      ENSP00000402656, ENST00000439155
      Conserved Domains (1) summary
      cd00033
      Location:146206
      Blast Score: 130
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p10 Primary Assembly

      Range
      196621008..196716634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      167862965..167958566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018912.1 Alternate CHM1_1.0

      Range
      203161383..203256948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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