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    UBQLN2 ubiquilin 2 [ Homo sapiens (human) ]

    Gene ID: 29978, updated on 9-Jun-2013
    Official Symbol
    UBQLN2provided by HGNC
    Official Full Name
    ubiquilin 2provided by HGNC
    Primary source
    HGNC:12509
    Locus tag
    HRIHFB2157
    See related
    Ensembl:ENSG00000188021; HPRD:02224; MIM:300264; Vega:OTTHUMG00000021669
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DSK2; ALS15; CHAP1; N4BP4; PLIC2; HRIHFB2157
    Summary
    This gene encodes an ubiquitin-like protein (ubiquilin) that shares high degree of similarity with related products in yeast, rat and frog. Ubiquilins contain a N-terminal ubiquitin-like domain and a C-terminal ubiquitin-associated domain. They physically associate with both proteasomes and ubiquitin ligases; and thus, are thought to functionally link the ubiquitination machinery to the proteasome to affect in vivo protein degradation. This ubiquilin has also been shown to bind the ATPase domain of the Hsp70-like Stch protein. [provided by RefSeq, Oct 2009]
    Location :
    Xp11.21
    Sequence :
    Chromosome: X; NC_000023.10 (56590026..56593443)
    See UBQLN2 in Epigenomics, MapViewer

    Chromosome X - NC_000023.10Genomic Context describing neighboring genes Neighboring gene glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) pseudogene Neighboring gene ribosomal protein L23a pseudogene 83 Neighboring gene Kruppel-like factor 8 Neighboring gene uncharacterized LOC550643 Neighboring gene ubiquinol-cytochrome c reductase binding protein pseudogene 1 Neighboring gene spindlin family, member 3

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Amyotrophic lateral sclerosis

    Summary from GeneReviews: Amyotrophic Lateral Sclerosis Overview Go to GeneReviews

    Disease Characteristics
    Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease involving both upper motor neurons (UMN) and lower motor neurons (LMN). UMN signs include hyperreflexia, extensor plantar response, increased muscle tone, and weakness in a topographic representation. LMN signs include weakness, muscle wasting, hyporeflexia, muscle cramps, and fasciculations. Initial presentation varies. Affected individuals typically present with either asymmetric focal weakness of the extremities (stumbling or poor handgrip) or bulbar findings (dysarthria, dysphagia). Other findings may include muscle fasciculations, muscle cramps, and labile affect, but not necessarily mood. Regardless of initial symptoms, atrophy and weakness eventually affect other muscles. The mean age of onset is 56 years in individuals with no known family history and 46 years in individuals with more than one affected family member (familial ALS or FALS). Average disease duration is about three years, but it can vary significantly. Death usually results from compromise of the respiratory muscles.
    Diagnosis Testing
    The diagnosis of ALS is based on clinical features, electrodiagnostic testing, and exclusion of other health conditions with related symptoms. Molecular genetic testing plays a prominent role in diagnosis of the genetic subtype and genetic counseling.
    Genetic Counseling
    Amyotrophic lateral sclerosis can be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis.
    References

    Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia

    Summary from GeneReviews: Amyotrophic Lateral Sclerosis Overview Go to GeneReviews

    Disease Characteristics
    Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease involving both upper motor neurons (UMN) and lower motor neurons (LMN). UMN signs include hyperreflexia, extensor plantar response, increased muscle tone, and weakness in a topographic representation. LMN signs include weakness, muscle wasting, hyporeflexia, muscle cramps, and fasciculations. Initial presentation varies. Affected individuals typically present with either asymmetric focal weakness of the extremities (stumbling or poor handgrip) or bulbar findings (dysarthria, dysphagia). Other findings may include muscle fasciculations, muscle cramps, and labile affect, but not necessarily mood. Regardless of initial symptoms, atrophy and weakness eventually affect other muscles. The mean age of onset is 56 years in individuals with no known family history and 46 years in individuals with more than one affected family member (familial ALS or FALS). Average disease duration is about three years, but it can vary significantly. Death usually results from compromise of the respiratory muscles.
    Diagnosis Testing
    The diagnosis of ALS is based on clinical features, electrodiagnostic testing, and exclusion of other health conditions with related symptoms. Molecular genetic testing plays a prominent role in diagnosis of the genetic subtype and genetic counseling.
    Genetic Counseling
    Amyotrophic lateral sclerosis can be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    Q9UHD9 Q9Y297 BTRC    HPRD  PubMed  
    Q9UHD9 P48723 HSPA13    HPRD  PubMed  
    Q9UHD9 O75400 PRPF40A    HPRD  PubMed  
    Q9UHD9 P55036 PSMD4    HPRD  PubMed  
    Q9UHD9 Q9Y3C5 RNF11    HPRD  PubMed  
    Q9UHD9 P04843 RPN1    HPRD  PubMed  
    Q9UHD9 Q05086 UBE3A    HPRD  PubMed  
    Q9UHD9 Q9NRR5 UBQLN4    HPRD  PubMed  
    BioGRID:119006 BioGRID:123290 AARSD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:106667 ADSL    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:112221 ATXN7    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:115335 BCL2L11    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:107106 BID    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:107173 C1QA    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:107263 CALU    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:116580 CD93    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:113743 CUL5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:109569 DNAJB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:108253 EEF1B2    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:108309 ELAVL1    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:119006 BioGRID:118965 EPN1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:116569 EPN2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:108374 EPS15    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:114430 HERC3    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:119006 BioGRID:120340 HERC6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:115060 HERPUD1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:112659 HSPA13    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:109698 IGBP1    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:119325 INSIG2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:110257 MARCKS    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:120798 NPLOC4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:111073 P4HB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:128397 PDE12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:111224 PFDN2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:111345 PLAUR    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:111553 PRKACA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:120792 PRPF40A    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:111656 PSMA2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:119006 BioGRID:111660 PSMA6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:119006 BioGRID:122751 RNASEH2B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:117941 RNF11    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:124834 RNF185    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:111977 RNH1    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:112038 RPA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:115747 SEC23A    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:114303 SNAP23    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:115788 SSSCA1    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:113722 STAM    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:117003 TARDBP    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:119006 BioGRID:113018 TPD52L2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:113116 TTC1    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:115365 UBA2    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:119006 BioGRID:113167 UBE2A    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:113185 UBE3A    BioGRID  PubMed Affinity Capture-Western; Co-fractionation; Two-hybrid 
    BioGRID:119006 BioGRID:124418 UBL7    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:119007 UBQLN1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:119006 BioGRID:119006 UBQLN2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:119006 BioGRID:121223 UBQLN4    BioGRID  PubMed Two-hybrid 
    BioGRID:119006 BioGRID:115085 USP34    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:113867 USP9X    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:113254 VBP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:116001 WDR4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:119006 BioGRID:115684 YAP1    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:124370 ZFYVE19    BioGRID  PubMed Co-fractionation 
    BioGRID:119006 BioGRID:114802 ZRANB2    BioGRID  PubMed Co-fractionation 
    • Protein processing in endoplasmic reticulum, organism-specific biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, organism-specific biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
    • Protein processing in endoplasmic reticulum, conserved biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, conserved biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...

    Markers

    Homology

    Clone Names

    • FLJ10167, FLJ56541

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    cell death IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
     
    Preferred Names
    ubiquilin-2
    Names
    ubiquilin-2
    Nedd4 binding protein 4
    ubiquitin-like product Chap1/Dsk2
    protein linking IAP with cytoskeleton 2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016249.1 RefSeqGene

      Range
      5001..8418
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_013444.3NP_038472.2  ubiquilin-2

      Status: REVIEWED

      Source sequence(s)
      AF189009, AU310783, BC069237, BI602998
      Consensus CDS
      CCDS14374.1
      UniProtKB/Swiss-Prot
      Q9UHD9
      Related
      ENSP00000345195, OTTHUMP00000023408, ENST00000338222, OTTHUMT00000056891
      Conserved Domains (3) summary
      cd00194
      Location:583620
      Blast Score: 98
      UBA; Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members of the ubiquitination pathway, UV excision repair proteins, and certain protein kinases. Although its specific role is so far unknown, it has been ...
      cd01808
      Location:45103
      Blast Score: 301
      hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
      pfam00240
      Location:45103
      Blast Score: 167
      ubiquitin; Ubiquitin family

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000023.10 Reference GRCh37.p10 Primary Assembly

      Range
      56590026..56593443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000155.1 Alternate HuRef

      Range
      53642196..53645647
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018934.1 Alternate CHM1_1.0

      Range
      56607466..56610883
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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