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GPR171 G protein-coupled receptor 171 [ Homo sapiens (human) ]

Gene ID: 29909, updated on 26-May-2016
Official Symbol
GPR171provided by HGNC
Official Full Name
G protein-coupled receptor 171provided by HGNC
Primary source
HGNC:HGNC:30057
See related
Ensembl:ENSG00000174946 HPRD:17071; Vega:OTTHUMG00000159861
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
H963
Orthologs
Location:
3q25.1
Exon count:
4
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 3 NC_000003.12 (151197754..151203222, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (150915537..150920997, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene clarin 1 Neighboring gene CLRN1 antisense RNA 1 Neighboring gene mediator complex subunit 12 like Neighboring gene RNA, 5S ribosomal pseudogene 145 Neighboring gene purinergic receptor P2Y14 Neighboring gene SET pseudogene 11 Neighboring gene G protein-coupled receptor 87

  • GPCRs, Class A Rhodopsin-like, organism-specific biosystem (from WikiPathways)
    GPCRs, Class A Rhodopsin-like, organism-specific biosystemThis pathway was created using the GPCRDB (Horn et al., 1998), http://www.cmbi.kun.nl/7tm/. The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used ...

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
G-protein coupled purinergic nucleotide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
G-protein coupled receptor activity NAS
Non-traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
G-protein coupled purinergic nucleotide receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
G-protein coupled receptor signaling pathway NAS
Non-traceable Author Statement
more info
PubMed 
negative regulation of myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane NAS
Non-traceable Author Statement
more info
PubMed 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
probable G-protein coupled receptor 171
Names
F730001G15Rik
G-protein coupled receptor H963
platelet activating receptor homolog

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013308.3NP_037440.3  probable G-protein coupled receptor 171

    See identical proteins and their annotated locations for NP_037440.3

    Status: VALIDATED

    Source sequence(s)
    AA353758, AC078816, AF002986, BC036815
    Consensus CDS
    CCDS3155.1
    UniProtKB/Swiss-Prot
    O14626
    Related
    ENSP00000308479, OTTHUMP00000216781, ENST00000309180, OTTHUMT00000357793
    Conserved Domains (1) summary
    pfam00001
    Location:37285
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p2 Primary Assembly

    Range
    151197754..151203222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005247402.2XP_005247459.1  

    See identical proteins and their annotated locations for XP_005247459.1

    UniProtKB/Swiss-Prot
    O14626
    Conserved Domains (1) summary
    pfam00001
    Location:37285
    7tm_1; 7 transmembrane receptor (rhodopsin family)
  2. XM_005247403.2XP_005247460.1  

    See identical proteins and their annotated locations for XP_005247460.1

    UniProtKB/Swiss-Prot
    O14626
    Conserved Domains (1) summary
    pfam00001
    Location:37285
    7tm_1; 7 transmembrane receptor (rhodopsin family)

Alternate CHM1_1.1

Genomic

  1. NC_018914.2 Alternate CHM1_1.1

    Range
    150878803..150884172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)