These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001011708.1 → NP_001011708.1 obg-like ATPase 1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an internal exon in the 5' region, as compared to variant 1, resulting in a downstream AUG start codon and an N-terminal shorter isoform (2).
- Source sequence(s)
-
AC016737, AK074710, BC012842
- Consensus CDS
-
CCDS42779.1
- UniProtKB/Swiss-Prot
-
Q9NTK5
- Related
- ENSP00000340167, OTTHUMP00000205066, ENST00000344357, OTTHUMT00000333876
- Conserved Domains (2) summary
-
- cd04867
Location:147 – 229
Blast Score: 454
- TGS_YchF_C; TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally conserved GTPase whose function is unknown. The N-terminal domain of the YchF protein belongs to the Obg-like family of GTPases, and some members of the ...
- cl09099
Location:1 – 145
Blast Score: 414
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
NM_013341.3 → NP_037473.3 obg-like ATPase 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC016737, BC012842
- Consensus CDS
-
CCDS2255.1
- UniProtKB/TrEMBL
-
D7EHM2
- UniProtKB/Swiss-Prot
-
Q9NTK5
- Related
- ENSP00000284719, OTTHUMP00000163173, ENST00000284719, OTTHUMT00000255454
- Conserved Domains (3) summary
-
- cd04867
Location:305 – 387
Blast Score: 463
- TGS_YchF_C; TGS_YchF_C: This subfamily represents TGS domain-containing YchF GTP-binding protein, a universally conserved GTPase whose function is unknown. The N-terminal domain of the YchF protein belongs to the Obg-like family of GTPases, and some members of the ...
- PTZ00258
Location:18 – 390
Blast Score: 1573
- PTZ00258; GTP-binding protein; Provisional
- cd01900
Location:25 – 303
Blast Score: 1138
- YchF; YchF GTPase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000002.11 Reference GRCh37.p5 Primary Assembly
- Range
- 174937175..175113365, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000134.1 Alternate HuRef
- Range
- 166816707..166992907, complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)