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    DP2809 thymidylate kinase [ Desulfotalea psychrophila LSv54 ]

    Gene ID: 2946455, updated on 13-Jun-2013
    Gene symbol
    DP2809
    Gene description
    thymidylate kinase
    Locus tag
    DP2809
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Desulfotalea psychrophila LSv54 (strain: LSv54)
    Lineage
    Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea
    Sequence :
    NC_006138.1 (3165321..3165929)

    NC_006138.1Genomic Context describing neighboring genes Neighboring gene ribonuclease HII Neighboring gene hypothetical protein Neighboring gene 4-hydroxythreonine-4-phosphate dehydrogenase PdxA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments. Rabus R, et al. Environ Microbiol, 2004 Sep. PMID 15305914.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    thymidylate kinase

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006138.1

      Range
      3165321..3165929
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_066545.1 thymidylate kinase [Desulfotalea psychrophila LSv54]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6AJE2
      Conserved Domains (2) summary
      PRK00698
      Location:6 – 200
      Blast Score: 502
      tmk; thymidylate kinase; Validated
      cd01672
      Location:7 – 197
      Blast Score: 433
      TMPK; Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CR522870.1 CAG37538.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6AJE2.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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