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Gltscr2 glioma tumor suppressor candidate region gene 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 292624, updated on 14-Sep-2014
Official Symbol
Gltscr2provided by RGD
Official Full Name
glioma tumor suppressor candidate region gene 2provided by RGD
Primary source
RGD:1303085
See related
Ensembl:ENSRNOG00000013023
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Summary
human homolog regulates the phosphorylation and turnover of tumor suppressor PTEN [RGD, Feb 2006]
Annotation information
Annotation category: partial on reference assembly
See Gltscr2 in MapViewer
Location:
1q21
Exon count:
12
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (77836522..77843991, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 1 NC_005100.3 (79101202..79108671, complement)

Chromosome 1 - NC_005100.4Genomic Context describing neighboring genes Neighboring gene ribosomal protein S12-like Neighboring gene ribosomal protein L9-like Neighboring gene EH-domain containing 2 Neighboring gene uncharacterized LOC103691043 Neighboring gene glioma tumor suppressor candidate region gene 1

  • Herpes simplex infection, organism-specific biosystem (from KEGG)
    Herpes simplex infection, organism-specific biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
  • Herpes simplex infection, conserved biosystem (from KEGG)
    Herpes simplex infection, conserved biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
poly(A) RNA binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
glioma tumor suppressor candidate region gene 2 protein
Names
glioma tumor suppressor candidate region gene 2 protein
preS1 binding protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_207591.1NP_997474.1  glioma tumor suppressor candidate region gene 2 protein

    See proteins identical to NP_997474.1

    Status: PROVISIONAL

    Source sequence(s)
    AY535002
    UniProtKB/TrEMBL
    Q6QLN3
    Related
    ENSRNOP00000017556, ENSRNOT00000017555
    Conserved Domains (1) summary
    pfam07767
    Location:47450
    Nop53; Nop53 (60S ribosomal biogenesis)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 

    Range
    77836522..77843991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000069.1 

    Range
    71119638..71127111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)