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Aga aspartylglucosaminidase [ Rattus norvegicus (Norway rat) ]

Gene ID: 290923, updated on 14-Sep-2014
Official Symbol
Agaprovided by RGD
Official Full Name
aspartylglucosaminidaseprovided by RGD
Primary source
RGD:1309646
See related
Ensembl:ENSRNOG00000000108
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
See Aga in MapViewer
Location:
16p11
Exon count:
10
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (41222225..41234163, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 16 NC_005115.3 (40992072..41004008, complement)

Chromosome 16 - NC_005115.4Genomic Context describing neighboring genes Neighboring gene high mobility group protein B1-like Neighboring gene cytochrome b-c1 complex subunit 6, mitochondrial pseudogene Neighboring gene poly(A) binding protein, cytoplasmic 1, pseudogene 1 Neighboring gene hypothetical protein LOC680911

  • Lysosome, organism-specific biosystem (from KEGG)
    Lysosome, organism-specific biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...
  • Lysosome, conserved biosystem (from KEGG)
    Lysosome, conserved biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...
  • Other glycan degradation, organism-specific biosystem (from KEGG)
    Other glycan degradation, organism-specific biosystem
    Other glycan degradation
  • Other glycan degradation, conserved biosystem (from KEGG)
    Other glycan degradation, conserved biosystem
    Other glycan degradation

Markers

Homology

Clone Names

  • MGC112709

Gene Ontology Provided by RGD

Function Evidence Code Pubs
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IDA
Inferred from Direct Assay
more info
PubMed 
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity ISO
Inferred from Sequence Orthology
more info
 
peptidase activity IEA
Inferred from Electronic Annotation
more info
 
protein self-association IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 
protein deglycosylation ISO
Inferred from Sequence Orthology
more info
 
protein maturation IEA
Inferred from Electronic Annotation
more info
 
protein maturation ISO
Inferred from Sequence Orthology
more info
 
proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
extracellular vesicular exosome IEA
Inferred from Electronic Annotation
more info
 
extracellular vesicular exosome ISO
Inferred from Sequence Orthology
more info
 
lysosome IDA
Inferred from Direct Assay
more info
PubMed 
lysosome ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase
Names
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase
glycosylasparaginase
N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase
NP_001026811.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031641.1NP_001026811.1  N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase precursor

    See proteins identical to NP_001026811.1

    Status: PROVISIONAL

    Source sequence(s)
    BC098718
    UniProtKB/Swiss-Prot
    P30919
    Related
    ENSRNOP00000000120, ENSRNOT00000000120
    Conserved Domains (1) summary
    cd04513
    Location:29330
    Blast Score: 939
    Glycosylasparaginase; Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU) ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005115.4 

    Range
    41222225..41234163
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006253111.2XP_006253173.1  

    Conserved Domains (1) summary
    cd04513
    Location:29349
    Blast Score: 910
    Glycosylasparaginase; Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU) ...

Alternate Rn_Celera

Genomic

  1. AC_000084.1 

    Range
    36605222..36617080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)