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ZC3H7A zinc finger CCCH-type containing 7A [ Homo sapiens (human) ]

Gene ID: 29066, updated on 8-May-2016
Official Symbol
ZC3H7Aprovided by HGNC
Official Full Name
zinc finger CCCH-type containing 7Aprovided by HGNC
Primary source
HGNC:HGNC:30959
See related
Ensembl:ENSG00000122299 HPRD:11694; Vega:OTTHUMG00000129825
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZC3H7; HSPC055; ZC3HDC7
Orthologs
Location:
16p13-p12
Exon count:
26
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 16 NC_000016.10 (11750586..11797258, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (11844442..11891114, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene lipopolysaccharide induced TNF factor Neighboring gene thioredoxin domain containing 11 Neighboring gene stannin Neighboring gene uncharacterized LOC105371084 Neighboring gene breast cancer anti-estrogen resistance 4 (non-protein coding) Neighboring gene ribosomal L1 domain containing 1

NHGRI GWAS Catalog

Description
Common variants at ten loci influence QT interval duration in the QTGEN Study.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ10027, FLJ20318

Gene Ontology Provided by GOA

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
zinc finger CCCH domain-containing protein 7A
Names
zinc finger CCCH type domain containing 7
zinc finger CCCH-type domain containing 7
zinc-finger protein AY163807

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014153.3NP_054872.2  zinc finger CCCH domain-containing protein 7A

    See identical proteins and their annotated locations for NP_054872.2

    Status: VALIDATED

    Source sequence(s)
    AY163807, BC046363, DA160892
    Consensus CDS
    CCDS10550.1
    UniProtKB/Swiss-Prot
    Q8IWR0
    Related
    ENSP00000347999, OTTHUMP00000160260, ENST00000355758, OTTHUMT00000252061
    Conserved Domains (4) summary
    smart00356
    Location:906926
    ZnF_C3H1; zinc finger
    pfam12171
    Location:857882
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    sd00020
    Location:859881
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00006
    Location:4671
    TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p2 Primary Assembly

    Range
    11750586..11797258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011522463.1XP_011520765.1  

    See identical proteins and their annotated locations for XP_011520765.1

    UniProtKB/Swiss-Prot
    Q8IWR0
    Conserved Domains (4) summary
    smart00356
    Location:906926
    ZnF_C3H1; zinc finger
    pfam12171
    Location:857882
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    sd00020
    Location:859881
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00006
    Location:4671
    TPR; TPR repeat [structural motif]
  2. XM_006720877.2XP_006720940.1  

    See identical proteins and their annotated locations for XP_006720940.1

    UniProtKB/Swiss-Prot
    Q8IWR0
    Conserved Domains (4) summary
    smart00356
    Location:906926
    ZnF_C3H1; zinc finger
    pfam12171
    Location:857882
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    sd00020
    Location:859881
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00006
    Location:4671
    TPR; TPR repeat [structural motif]
  3. XM_011522464.1XP_011520766.1  

    Conserved Domains (3) summary
    smart00356
    Location:667687
    ZnF_C3H1; zinc finger
    pfam12171
    Location:618643
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    sd00020
    Location:620642
    ZF_C2H2; C2H2 Zn finger [structural motif]
  4. XM_005255273.2XP_005255330.1  

    Conserved Domains (3) summary
    smart00356
    Location:515535
    ZnF_C3H1; zinc finger
    pfam12171
    Location:466491
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    sd00020
    Location:468490
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_932825.1 RNA Sequence

Alternate CHM1_1.1

Genomic

  1. NC_018927.2 Alternate CHM1_1.1

    Range
    11844381..11891048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)