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    ATAD2 ATPase family, AAA domain containing 2 [ Homo sapiens ]

    Gene ID: 29028, updated on 11-May-2012

    Summary

    Official Symbol
    ATAD2provided by HGNC
    Official Full Name
    ATPase family, AAA domain containing 2provided by HGNC
    Primary source
    HGNC:30123
    Locus tag
    L16
    See related
    Ensembl:ENSG00000156802; HPRD:10678; MIM:611941; Vega:OTTHUMG00000165090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANCCA; PRO2000; MGC5254; MGC29843; MGC131938; MGC142216; DKFZp667N1320
    Summary
    A large family of ATPases has been described, whose key feature is that they share a conserved region of about 220 amino acids that contains an ATP-binding site. The proteins that belong to this family either contain one or two AAA (ATPases Associated with diverse cellular Activities) domains. AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes. The protein encoded by this gene contains two AAA domains, as well as a bromodomain. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    8q24.13
    Sequence :
    Chromosome: 8; NC_000008.10 (124332090..124408705, complement)
    See ATAD2 in Epigenomics, MapViewer

    Chromosome 8 - NC_000008.10Genomic Context describing neighboring genes Neighboring gene ZHX1-C8ORF76 readthrough Neighboring gene transfer RNA phenylalanine 14 (anticodon GAA) pseudogene Neighboring gene zinc fingers and homeoboxes 1 Neighboring gene 17beta-hydroxysteroid dehydrogenase pseudogene Neighboring gene microRNA 548d-1 Neighboring gene IMP (inosine monophosphate) dehydrogenase 1 pseudogene 6 Neighboring gene WDYHV motif containing 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:118827 BioGRID:108201 E2F1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:118827 BioGRID:108202 E2F2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:118827 BioGRID:108203 E2F3    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:118827 BioGRID:108206 E2F4    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:118827 BioGRID:108403 ESR1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:118827 BioGRID:113966 HIST2H4A    BioGRID  PubMed Reconstituted Complex 
    BioGRID:118827 BioGRID:113895 HIST3H3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:118827 BioGRID:110694 MYC    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:118827 BioGRID:113841 NCOA3    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:118827 BioGRID:112497 SUMO2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:118827 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    regulation of transcription, DNA-dependent IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    NOT nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    ATPase family AAA domain-containing protein 2
    Names
    ATPase family AAA domain-containing protein 2
    AAA nuclear coregulator cancer-associated protein
    NP_054828.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_014109.3NP_054828.2  ATPase family AAA domain-containing protein 2

      Status: REVIEWED

      Source sequence(s)
      BC113656, BP314109, CA441499, CB159561
      Consensus CDS
      CCDS6343.1
      UniProtKB/Swiss-Prot
      Q6PL18
      Related
      ENSP00000287394, OTTHUMP00000228393, ENST00000287394, OTTHUMT00000381766
      Conserved Domains (3) summary
      COG0464
      Location:445934
      Blast Score: 436
      SpoVK; ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones]
      cd00009
      Location:450598
      Blast Score: 266
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      cd05528
      Location:9871097
      Blast Score: 464
      Bromo_AAA; Bromodomain; sub-family co-occurring with AAA domains. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine. The structure(2DKW) in this ...

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000008.10 Reference GRCh37.p5 Primary Assembly

      Range
      124332090..124408705, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000140.1 Alternate HuRef

      Range
      119657854..119734371, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC021305.9 (15859..91805) None
    genomic CH471060.1 EAW92033.1
      EAW92034.1
      EAW92035.1
      EAW92036.1
    mRNA AF118088.1 AAF22032.1
    mRNA AK097133.1 BAC04959.1
    mRNA AL833653.1 CAH56229.1
    mRNA AY598335.1 AAT06746.1
    mRNA BC007123.1 None
    mRNA BC010686.1 AAH10686.1
    mRNA BC019909.1 AAH19909.1
    mRNA BC112942.1 None
    mRNA BC113656.1 AAI13657.1
    mRNA BC143716.1 None
    mRNA BP314109.1 None
    mRNA CA441499.1 None
    mRNA CB159561.1 None
    mRNA CR749832.1 CAH18688.1
    other-genetic JF432508.1 ADZ15725.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6PL18.1 GenPept UniProtKB/Swiss-Prot:Q6PL18

      Supplemental Content

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