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KLLA0D01089g hypothetical protein [ Kluyveromyces lactis NRRL Y-1140 ]

Gene ID: 2892937, updated on 11-Jul-2015
Gene symbol
KLLA0D01089g
Gene description
hypothetical protein
Locus tag
KLLA0D01089g
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Kluyveromyces lactis NRRL Y-1140 (strain: NRRL Y-1140)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces
Location:
chromosome: D
Exon count:
1
Sequence:
Chromosome: D; NC_006040.1 (97438..100161, complement)

Chromosome D - NC_006040.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...

Homology

Names
hypothetical protein
XP_453119.1
  • KLLA0D01089p; similar to uniprot|Q08387 Saccharomyces cerevisiae YOR005C DNL4 DNA ligase required for nonhomologous end- joining (NHEJ) forms stable heterodimer with required cofactor Lif1p catalyzes DNA ligation as part of a complex with Lif1p and Nej1p involved in meiosis not essential for vegetative growth

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006040.1 Reference assembly

    Range
    97438..100161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_453119.1XP_453119.1  hypothetical protein [Kluyveromyces lactis NRRL Y-1140]

    See identical proteins and their annotated locations for XP_453119.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6CSH0
    Conserved Domains (5) summary
    cd07968
    Location:470607
    OBF_DNA_ligase_IV; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase IV is a DNA-binding module that is part of the catalytic core unit
    cd07903
    Location:237467
    Adenylation_DNA_ligase_IV; Adenylation domain of DNA Ligase IV
    smart00292
    Location:657741
    BRCT; breast cancer carboxy-terminal domain
    pfam04675
    Location:12208
    DNA_ligase_A_N; DNA ligase N terminus
    TIGR00574
    Location:76613
    dnl1; DNA ligase I, ATP-dependent (dnl1)