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Kiss1 KiSS-1 metastasis-suppressor [ Rattus norvegicus (Norway rat) ]

Gene ID: 289023, updated on 13-Apr-2024

Summary

Official Symbol
Kiss1provided by RGD
Official Full Name
KiSS-1 metastasis-suppressorprovided by RGD
Primary source
RGD:727850
See related
Ensembl:ENSRNOG00000047481 AllianceGenome:RGD:727850
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Eseptin
Summary
Enables kisspeptin receptor binding activity. Involved in several processes, including generation of ovulation cycle rhythm; positive regulation of cell communication; and positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway. Located in several cellular components, including apical plasma membrane; extracellular space; and neuronal cell body. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 13 with or without anosmia. Orthologous to human KISS1 (KiSS-1 metastasis suppressor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 3.2), Liver (RPKM 2.0) and 4 other tissues See more
Orthologs
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Genomic context

See Kiss1 in Genome Data Viewer
Location:
13q13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (47327159..47332759)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (44775106..44780707)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (50529506..50537603, complement)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A6 Neighboring gene golgi transport 1A Neighboring gene uncharacterized LOC102550525 Neighboring gene renin Neighboring gene ethanolamine kinase 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding TAS
Traceable Author Statement
more info
PubMed 
enables kisspeptin receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables kisspeptin receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in G protein-coupled receptor signaling pathway TAS
Traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within decidualization ISO
Inferred from Sequence Orthology
more info
 
involved_in generation of ovulation cycle rhythm IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within negative regulation of cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell population proliferation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within negative regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of MAPK cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cytosolic calcium ion concentration IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of growth hormone secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of luteinizing hormone secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of luteinizing hormone secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT involved_in positive regulation of stress-activated MAPK cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of synaptic transmission IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
metastasis-suppressor KiSS-1
Names
Kiss1 variant E1a-E2b-E3
Kiss1 variant E1b-E2a-E3
Kiss1 variant E1b-E2b-E3
MLL septin-like fusion
kisspeptin-1
metastin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001412625.1NP_001399554.1  metastasis-suppressor KiSS-1 precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/Swiss-Prot
    Q7TSB7
    UniProtKB/TrEMBL
    J7H5M8, J7HBH5
    Related
    ENSRNOP00000068332.1, ENSRNOT00000076506.2
  2. NM_181692.2NP_859043.1  metastasis-suppressor KiSS-1 precursor

    See identical proteins and their annotated locations for NP_859043.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/Swiss-Prot
    Q7TSB7
    UniProtKB/TrEMBL
    J7H5M8, J7HBH5
    Conserved Domains (1) summary
    pfam15152
    Location:46120
    Kisspeptin; Kisspeptin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    47327159..47332759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)