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    rpsK 30S ribosomal protein S11 [ Pectobacterium atrosepticum SCRI1043 ]

    Gene ID: 2884469, updated on 14-Dec-2011
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    Summary

    Gene symbol
    rpsK
    Gene description
    30S ribosomal protein S11
    Locus tag
    ECA4008
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Pectobacterium atrosepticum SCRI1043 (strain: SCRI1043, old-name: Erwinia carotovora subsp. atroseptica SCRI1043)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium
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    Genomic context

    Sequence :
    NC_004547.2 (4489775..4490164, complement)

    NC_004547.2Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase subunit alpha Neighboring gene 30S ribosomal protein S4 Neighboring gene 30S ribosomal protein S13 Neighboring gene miscRNA Neighboring gene 50S ribosomal protein L36

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors. Bell KS, et al. Proc Natl Acad Sci U S A, 2004 Jul 27. PMID 15263089.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    General gene information

    Pathways from BioSystems

    Miscellaneous features

    • Loc: c4489876-4489808 PS00054 Ribosomal protein S11 signature.
    • Loc: c4490110-4489781 HMMPfam hit to PF00411, DE Ribosomal protein S11, score 2.2e-75
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    General protein information

    Names
    30S ribosomal protein S11
    YP_052095.1
    • located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004547.2

      Range
      4489775..4490164, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_052095.1 rpsK gene product [Pectobacterium atrosepticum SCRI1043]

      UniProtKB/Swiss-Prot
      Q6CZZ3
      Conserved Domains (1) summary
      cl00332
      Location:2 – 129
      Blast Score: 562
      Ribosomal_S11; Ribosomal protein S11
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BX950851.1 CAG76905.1
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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