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    capC capsular polysaccharide synthesis enzyme [ Staphylococcus aureus subsp. aureus MRSA252 ]

    Gene ID: 2861342, updated on 16-Jun-2013
    Gene symbol
    capC
    Gene description
    capsular polysaccharide synthesis enzyme
    Locus tag
    SAR0153
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
    Sequence :
    NC_002952.2 (170031..170795)

    NC_002952.2Genomic Context describing neighboring genes Neighboring gene capsular polysaccharide synthesis enzyme Neighboring gene capsular polysaccharide synthesis enzyme Neighboring gene capsular polysaccharide synthesis enzyme Neighboring gene capsular polysaccharide synthesis enzyme Neighboring gene capsular polysaccharide synthesis enzyme

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The Staphylococcus aureus response to unsaturated long chain free fatty acids: survival mechanisms and virulence implications. Kenny JG, et al. PLoS One, 2009. PMID 19183815.
    2. Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance. Holden MT, et al. Proc Natl Acad Sci U S A, 2004 Jun 29. PMID 15213324.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Miscellaneous features

    • Loc: 170343-170642 Pfam match to entry PF02811 PHP_C, PHP domain C-terminal region, score 46.40, E-value 6.4e-10
    Names
    capsular polysaccharide synthesis enzyme
    YP_039618.1
    • Highly imilar to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8C TR:P72369 (EMBL:U73374) (254 aa) fasta scores: E(): 1.5e-96, 99.213% id in 254 aa, and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap5C TR:P95697 (EMBL:U81973) (254 aa) fasta scores: E(): 4.2e-96, 98.425% id in 254 aa. Similar to SAR2743, 52.549% identity (53.175% ungapped) in 255 aa overlap

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002952.2

      Range
      170031..170795
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_039618.1 capsular polysaccharide synthesis enzyme [Staphylococcus aureus subsp. aureus MRSA252]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6GKF4
      Conserved Domains (1) summary
      COG4464
      Location:1 – 252
      Blast Score: 1019
      CapC; Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
    Nucleotide Protein
    Heading Accession and Version
    genomic BX571856.1 CAG39180.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6GKF4.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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