U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC6A6 solute carrier family 6 member 6 [ Bos taurus (cattle) ]

Gene ID: 282366, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
SLC6A6provided by VGNC
Official Full Name
solute carrier family 6 member 6provided by VGNC
Primary source
VGNC:VGNC:34922
See related
BGD:BT16682; Ensembl:ENSBTAG00000011088
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 22
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (57784837..57868851, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 174 Neighboring gene glutamate receptor interacting protein 2 Neighboring gene microRNA mir-2888-2 Neighboring gene uncharacterized LOC101907298 Neighboring gene uncharacterized LOC104975607 Neighboring gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular characterization of taurine transport in bovine aortic endothelial cells. Qian X, et al. Biochim Biophys Acta, 2000 Dec 20. PMID 11118543
  2. Osmosensitive gene expression of taurine transporter and cyclin C in embryonic fibroblast cells. Oh C, et al. Adv Exp Med Biol, 2006. PMID 17153588
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results indicate that the gene expressions of TauT and cyclin C are cooperatively regulated under hypotonic conditions.
    Title: Osmosensitive gene expression of taurine transporter and cyclin C in embryonic fibroblast cells.
Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables taurine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in taurine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium- and chloride-dependent taurine transporter
Names
solute carrier family 6 (neurotransmitter transporter, taurine), member 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174610.2 → NP_777035.1  sodium- and chloride-dependent taurine transporter

    See identical proteins and their annotated locations for NP_777035.1

    Status: PROVISIONAL

    Source sequence(s)
    AF260239
    UniProtKB/Swiss-Prot
    Q9MZ34
    UniProtKB/TrEMBL
    F1N460
    Related
    ENSBTAP00000014720.7, ENSBTAT00000014720.7
    Conserved Domains (1) summary
    cl00456
    Location:41 → 582
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57784837..57868851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024982400.2 → XP_024838168.2  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98
    Related
    ENSBTAP00000058992.1, ENSBTAT00000066934.2

  2. XM_024982404.2 → XP_024838172.1  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98, F1N460
    Conserved Domains (1) summary
    cl00456
    Location:41 → 582
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  3. XM_024982403.2 → XP_024838171.1  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98, F1N460
    Conserved Domains (1) summary
    cl00456
    Location:41 → 582
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  4. XM_010817971.4 → XP_010816273.2  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98, F1N460
    Conserved Domains (1) summary
    cl00456
    Location:41 → 582
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  5. XM_059879462.1 → XP_059735445.1  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98

  6. XM_059879460.1 → XP_059735443.1  sodium- and chloride-dependent taurine transporter isoform X2

    Related
    ENSBTAP00000073813.2, ENSBTAT00000075630.2

  7. XM_024982402.2 → XP_024838170.1  sodium- and chloride-dependent taurine transporter isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MLY6
    Conserved Domains (1) summary
    cl00456
    Location:94 → 635
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  8. XM_059879463.1 → XP_059735446.1  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98

  9. XM_059879461.1 → XP_059735444.1  sodium- and chloride-dependent taurine transporter isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MQ98
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MZ34.1 GenPept UniProtKB/Swiss-Prot:Q9MZ34

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous