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    TP53 tumor protein p53 [ Bos taurus (cattle) ]

    Gene ID: 281542, updated on 22-May-2013
    Symbol
    TP53
    Full Name
    tumor protein p53
    Locus tag
    BOS_18908
    See related
    BGD:BT10936; Ensembl:ENSBTAG00000001069
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Location :
    19q15
    Sequence :
    Chromosome: 19; AC_000176.1 (27985494..27997841, complement)
    See TP53 in MapViewer

    Chromosome 19 - AC_000176.1Genomic Context describing neighboring genes Neighboring gene sex hormone-binding globulin Neighboring gene uncharacterized LOC100847753 Neighboring gene ATPase, Na+/K+ transporting, beta 2 polypeptide Neighboring gene WD repeat containing, antisense to TP53 Neighboring gene ephrin-B3

    Related articles in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

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    • Apoptosis, organism-specific biosystem (from KEGG)
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    • Autodegradation of the E3 ubiquitin ligase COP1, organism-specific biosystem (from REACTOME)
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    • Basal cell carcinoma, organism-specific biosystem (from KEGG)
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    • Basal cell carcinoma, conserved biosystem (from KEGG)
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    • Bladder cancer, conserved biosystem (from KEGG)
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    • Cell cycle, conserved biosystem (from KEGG)
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    • Chronic myeloid leukemia, organism-specific biosystem (from KEGG)
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    • Chronic myeloid leukemia, conserved biosystem (from KEGG)
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    • Colorectal cancer, organism-specific biosystem (from KEGG)
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    • Endometrial cancer, organism-specific biosystem (from KEGG)
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      Hemostasis, organism-specific biosystemcomputationally inferred pathway (not manually curated)
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    • MAPK signaling pathway, organism-specific biosystem (from WikiPathways)
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    • MAPK signaling pathway, conserved biosystem (from KEGG)
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    • Measles, conserved biosystem (from KEGG)
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    • Melanoma, organism-specific biosystem (from KEGG)
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    • Melanoma, conserved biosystem (from KEGG)
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    • Neurotrophin signaling pathway, organism-specific biosystem (from KEGG)
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    • PI3K-Akt signaling pathway, organism-specific biosystem (from KEGG)
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    • Pancreatic cancer, organism-specific biosystem (from KEGG)
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    • Small cell lung cancer, conserved biosystem (from KEGG)
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    • Thyroid cancer, organism-specific biosystem (from KEGG)
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    • Transcriptional activation of cell cycle inhibitor p21, organism-specific biosystem (from REACTOME)
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    • Transcriptional activation of p53 responsive genes, organism-specific biosystem (from REACTOME)
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    • Transcriptional misregulation in cancer, organism-specific biosystem (from KEGG)
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    • Viral carcinogenesis, conserved biosystem (from KEGG)
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    • p53 signaling pathway, organism-specific biosystem (from KEGG)
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    • p53 signaling pathway, conserved biosystem (from KEGG)
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    • p53-Dependent G1 DNA Damage Response, organism-specific biosystem (from REACTOME)
      p53-Dependent G1 DNA Damage Response, organism-specific biosystemcomputationally inferred pathway (not manually curated)
    • p53-Dependent G1/S DNA damage checkpoint, organism-specific biosystem (from REACTOME)
      p53-Dependent G1/S DNA damage checkpoint, organism-specific biosystemcomputationally inferred pathway (not manually curated)

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    MDM2/MDM4 family protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription IEA
    Inferred from Electronic Annotation
    more info
     
    RNA polymerase II transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    chaperone binding IEA
    Inferred from Electronic Annotation
    more info
     
    chromatin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    copper ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    damaged DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    double-stranded DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    histone acetyltransferase binding IEA
    Inferred from Electronic Annotation
    more info
     
    histone deacetylase regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    p53 binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protease binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein N-terminus binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphatase 2A binding IEA
    Inferred from Electronic Annotation
    more info
     
    receptor tyrosine kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    sequence-specific DNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    sequence-specific DNA binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    transcription regulatory region DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    B cell lineage commitment IEA
    Inferred from Electronic Annotation
    more info
     
    DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IEA
    Inferred from Electronic Annotation
    more info
     
    DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    DNA strand renaturation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    ER overload response IEA
    Inferred from Electronic Annotation
    more info
     
    Ras protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    T cell differentiation in thymus IEA
    Inferred from Electronic Annotation
    more info
     
    T cell lineage commitment IEA
    Inferred from Electronic Annotation
    more info
     
    T cell proliferation involved in immune response IEA
    Inferred from Electronic Annotation
    more info
     
    apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cell aging ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cellular response to UV ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cellular response to drug IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to glucose starvation IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to ionizing radiation IEA
    Inferred from Electronic Annotation
    more info
     
    central nervous system development IEA
    Inferred from Electronic Annotation
    more info
     
    chromosome organization IEA
    Inferred from Electronic Annotation
    more info
     
    determination of adult lifespan IEA
    Inferred from Electronic Annotation
    more info
     
    double-strand break repair IEA
    Inferred from Electronic Annotation
    more info
     
    gastrulation IEA
    Inferred from Electronic Annotation
    more info
     
    in utero embryonic development IEA
    Inferred from Electronic Annotation
    more info
     
    induction of apoptosis IEA
    Inferred from Electronic Annotation
    more info
     
    intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    mitotic G1 DNA damage checkpoint ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    mitotic cell cycle arrest IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organism growth IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organismal development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of cell growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of fibroblast proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of neuroblast proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of transcription from RNA polymerase II promoter ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    neuron apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide-excision repair ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    oxidative stress-induced premature senescence IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cell aging IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of histone deacetylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of intrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of neuron apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of peptidyl-tyrosine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of protein oligomerization IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of reactive oxygen species metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of release of cytochrome c from mitochondria ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation of thymocyte apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    protein import into nucleus, translocation IEA
    Inferred from Electronic Annotation
    more info
     
    protein tetramerization IEA
    Inferred from Electronic Annotation
    more info
     
    rRNA transcription IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of mitochondrial membrane permeability IEA
    Inferred from Electronic Annotation
    more info
     
    release of cytochrome c from mitochondria IEA
    Inferred from Electronic Annotation
    more info
     
    replicative senescence IEA
    Inferred from Electronic Annotation
    more info
     
    response to X-ray ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    response to antibiotic IEA
    Inferred from Electronic Annotation
    more info
     
    response to gamma radiation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    response to salt stress IEA
    Inferred from Electronic Annotation
    more info
     
    somitogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    transforming growth factor beta receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    PML body IEA
    Inferred from Electronic Annotation
    more info
     
    chromatin ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nuclear chromatin IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear matrix IEA
    Inferred from Electronic Annotation
    more info
     
    nucleolus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    replication fork ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
     
    transcription factor complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Preferred Names
    cellular tumor antigen p53
    Names
    cellular tumor antigen p53
    tumor protein 53
    tumor suppressor p53
    p53 tumor suppressor phosphoprotein
    tumor protein p53 (Li-Fraumeni syndrome)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174201.2NP_776626.1  cellular tumor antigen p53

      Status: PROVISIONAL

      Source sequence(s)
      BC102440
      UniProtKB/TrEMBL
      F1SY23
      UniProtKB/Swiss-Prot
      P67939
      Related
      ENSBTAP00000001420, ENSBTAT00000001420
      Conserved Domains (2) summary
      pfam07710
      Location:312352
      Blast Score: 162
      P53_tetramer; P53 tetramerisation motif
      cd08367
      Location:101281
      Blast Score: 711
      P53; P53 DNA-binding domain

    RefSeqs of Annotated Genomes: Build 6.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_taurus_UMD_3.1 Primary Assembly

    Genomic

    1. AC_000176.1 Reference Bos_taurus_UMD_3.1 Primary Assembly

      Range
      27985494..27997841, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Btau_4.6.1

    Genomic

    1. NC_007317.5 Alternate Btau_4.6.1

      Range
      27701399..27713750, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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