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SRY sex determining region Y [ Bos taurus (cattle) ]

Gene ID: 280931, updated on 25-Jul-2015
Gene symbol
SRY
Gene description
sex determining region Y
See related
Ensembl:ENSBTAG00000047779
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
See SRY in MapViewer
Location:
chromosome: Y
Exon count:
1
Annotation release Status Assembly Chr Location
104 current Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 13 AC_000170.1 (5424637..5425326, complement)

Chromosome 13 - AC_000170.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101901915 Neighboring gene uncharacterized LOC104973695 Neighboring gene uncharacterized LOC101902229 Neighboring gene uncharacterized LOC101902069 Neighboring gene BTB (POZ) domain containing 3

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding, bending IEA
Inferred from Electronic Annotation
more info
 
calmodulin binding IEA
Inferred from Electronic Annotation
more info
 
protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
Inferred from Electronic Annotation
more info
 
transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
male gonad development IEA
Inferred from Electronic Annotation
more info
 
male sex determination IEA
Inferred from Electronic Annotation
more info
 
negative regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
positive regulation of male gonad development IEA
Inferred from Electronic Annotation
more info
 
positive regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nuclear speck IEA
Inferred from Electronic Annotation
more info
 
nuclear transcription factor complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
sex-determining region Y protein
Names
sex determining factor Y
sex-determining region of the Y-chromosome
testis-determining factor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014385.1NP_001014407.1  sex-determining region Y protein

    See identical proteins and their annotated locations for NP_001014407.1

    Status: PROVISIONAL

    Source sequence(s)
    AB039748
    UniProtKB/TrEMBL
    B6S2A2
    UniProtKB/Swiss-Prot
    Q03255
    Related
    ENSBTAP00000056194, ENSBTAT00000062957
    Conserved Domains (1) summary
    cd01388
    Location:53124
    SOX-TCF_HMG-box; SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_taurus_UMD_3.1.1 Primary Assembly

Genomic

  1. AC_000170.1 Reference Bos_taurus_UMD_3.1.1 Primary Assembly

    Range
    5424637..5425326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Btau_4.6.1

Genomic

  1. NC_016145.1 Alternate Btau_4.6.1

    Range
    42225210..42225899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)