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    zormin [ Drosophila melanogaster ]

    Gene ID: 2769001, updated on 10-May-2012
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    Summary

    Official Symbol
    zorminprovided by Flybase
    Primary source
    FLYBASE:FBgn0052311
    Locus tag
    Dmel_CG33484
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH09541; CG11850; CG11952; CG11953; CG1282; CG32307; CG32309; CG32310; CG32311; CG33484; CG5699; CT36990; Dmel\CG33484
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    Genomic context

    Location :
    62C4-62D1
    Sequence :
    Chromosome: 3L; NT_037436.3 (2117466..2150089, complement)
    See zormin in Epigenomics, MapViewer

    Chromosome 3L - NT_037436.3Genomic Context describing neighboring genes Neighboring gene CG42355 gene product from transcript CG42355-RC Neighboring gene sallimus Neighboring gene ncRNA Neighboring gene CG15822 gene product from transcript CG15822-RD Neighboring gene CG15879 gene product from transcript CG15879-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Two subunits specific to the PBAP chromatin remodeling complex have distinct and redundant functions during drosophila development. Carrera I, et al. Mol Cell Biol, 2008 Sep. PMID 18573871.
    2. Mononuclear muscle cells in Drosophila ovaries revealed by GFP protein traps. Hudson AM, et al. Dev Biol, 2008 Feb 15. PMID 18199432.
    3. Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. Baker DA, et al. BMC Genomics, 2007 Dec 10. PMID 18070343.
    4. Titin in insect spermatocyte spindle fibers associates with microtubules, actin, myosin and the matrix proteins skeletor, megator and chromator. Fabian L, et al. J Cell Sci, 2007 Jul 1. PMID 17591688.
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:77850 BioGRID:57762 CG12496    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:67654 CG13840    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:67185 CG14317    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:57693 CG14818    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:61844 CG1599    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:68465 CG2218    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:63154 CG3074    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:58133 CG4617    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:60729 CG5792    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:61695 CG8642    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:62056 Ef1alpha48D    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:57914 HLH4C    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:58460 Hsp60    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:59275 Mer    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:68443 Mlc2    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:62546 Nup62    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:78234 Parp    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:58080 Pat1    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:63519 Pof    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:68008 RASSF8    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:60275 RpS13    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:59836 Tps1    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:58076 dx    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:59888 mRpL24    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:64116 mad2    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:65494 polo    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:61701 ptc    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:59774 sec5    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:62816 sec6    BioGRID  PubMed Two-hybrid 
    BioGRID:77850 BioGRID:62154 stil    BioGRID  PubMed Two-hybrid 
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    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    structural constituent of cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
    		  
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    General protein information

    Preferred Names
    CG33484 gene product from transcript CG33484-RC
    Names
    CG33484-PA
    CG33484-PB
    CG33484-PC
    CG33484-PD
    D-titin
    titin
    zormin
    zormin-PA
    zormin-PB
    zormin-PC
    zormin-PD
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.3

      Range
      2117466..2150089, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001043113.1 → NP_001036578.1  zormin, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8J5
      Related
      FBpp0110154, FBtr0110857
      Conserved Domains (6) summary
      cd00176
      Location:120 – 343
      Blast Score: 134
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      COG1196
      Location:746 – 1100
      Blast Score: 131
      Smc; Chromosome segregation ATPases [Cell division and chromosome partitioning]
      cd00096
      Location:1497 – 1564
      Blast Score: 135
      Ig; Immunoglobulin domain
      pfam07679
      Location:1689 – 1773
      Blast Score: 251
      I-set; Immunoglobulin I-set domain
      cl02488
      Location:979 – 1082
      Blast Score: 97
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl11960
      Location:2241 – 2311
      Blast Score: 154
      Ig; Immunoglobulin domain

    2. NM_206240.1 → NP_995962.1  zormin, isoform A [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W053
      Related
      FBpp0088803, FBtr0089864
      Conserved Domains (6) summary
      cd00176
      Location:120 – 343
      Blast Score: 137
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      COG1196
      Location:746 – 1100
      Blast Score: 134
      Smc; Chromosome segregation ATPases [Cell division and chromosome partitioning]
      cd00096
      Location:1497 – 1564
      Blast Score: 136
      Ig; Immunoglobulin domain
      pfam07679
      Location:2848 – 2937
      Blast Score: 252
      I-set; Immunoglobulin I-set domain
      cl02488
      Location:979 – 1082
      Blast Score: 98
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl11960
      Location:2241 – 2311
      Blast Score: 155
      Ig; Immunoglobulin domain

    3. NM_001043112.1 → NP_001036577.1  zormin, isoform B [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8J4
      Related
      FBpp0110153, FBtr0110856
      Conserved Domains (6) summary
      cd00176
      Location:120 – 343
      Blast Score: 139
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      COG1196
      Location:746 – 1100
      Blast Score: 136
      Smc; Chromosome segregation ATPases [Cell division and chromosome partitioning]
      cd00096
      Location:1497 – 1564
      Blast Score: 136
      Ig; Immunoglobulin domain
      pfam07679
      Location:2992 – 3081
      Blast Score: 252
      I-set; Immunoglobulin I-set domain
      cl02488
      Location:979 – 1082
      Blast Score: 99
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl11960
      Location:2241 – 2311
      Blast Score: 155
      Ig; Immunoglobulin domain

    4. NM_001043114.1 → NP_001036579.1  zormin, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8J3
      Related
      FBpp0110155, FBtr0110858
      Conserved Domains (6) summary
      cd00176
      Location:120 – 343
      Blast Score: 143
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      COG1196
      Location:746 – 1100
      Blast Score: 139
      Smc; Chromosome segregation ATPases [Cell division and chromosome partitioning]
      cd00096
      Location:1497 – 1564
      Blast Score: 135
      Ig; Immunoglobulin domain
      pfam07679
      Location:3553 – 3642
      Blast Score: 251
      I-set; Immunoglobulin I-set domain
      cl02488
      Location:979 – 1082
      Blast Score: 101
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl11960
      Location:2241 – 2311
      Blast Score: 153
      Ig; Immunoglobulin domain
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014296.4 ABI31229.1
    genomic AE014296.4 AAF47606.3
    genomic AE014296.4 ABI31228.1
    genomic AE014296.4 ABI31230.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W053.1 GenPept
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    Additional Links

    Gene LinkOut

      Supplemental Content