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    ung uracil-DNA glycosylase [ Yersinia pestis biovar Microtus str. 91001 ]

    Gene ID: 2763528, updated on 5-Dec-2011
    Gene symbol
    ung
    Gene description
    uracil-DNA glycosylase
    Locus tag
    YP_2508
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Yersinia pestis biovar Microtus str. 91001 (strain: 91001, biovar: Microtus, old-name: Yersinia pestis biovar Medievalis str. 91001)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia
    Sequence :
    NC_005810.1 (2779108..2779818, complement)

    NC_005810.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene pyrrolidone-carboxylate peptidase Neighboring gene autonomous glycyl radical cofactor GrcA Neighboring gene phospholipase A

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans. Song Y, et al. DNA Res, 2004 Jun 30. PMID 15368893.
    2. Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus. Zhou D, et al. J Bacteriol, 2004 Aug. PMID 15262951.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • Base excision repair, organism-specific biosystem (from KEGG)
      Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
    • Base excision repair, conserved biosystem (from KEGG)
      Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
    Names
    uracil-DNA glycosylase
    NP_993829.1
    • Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005810.1

      Range
      2779108..2779818, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_993829.1 uracil-DNA glycosylase [Yersinia pestis biovar Microtus str. 91001]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8ZD85
      Conserved Domains (1) summary
      cd10027
      Location:26 – 228
      Blast Score: 888
      UDG_F1; Family 1 of Uracil-DNA glycosylase (UDG) enzymes
    Nucleotide Protein
    Heading Accession and Version
    genomic AE017042.1 AAS62706.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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