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    NAP1L5 nucleosome assembly protein 1-like 5 [ Homo sapiens ]

    Gene ID: 266812, updated on 11-May-2012
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    Summary

    Official Symbol
    NAP1L5provided by HGNC
    Official Full Name
    nucleosome assembly protein 1-like 5provided by HGNC
    Primary source
    HGNC:19968
    See related
    Ensembl:ENSG00000177432; HPRD:17626; MIM:612203; Vega:OTTHUMG00000130950
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DRLM
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    Genomic context

    Location :
    4q22.1; 4q21-q22
    Sequence :
    Chromosome: 4; NC_000004.11 (89617066..89619023, complement)
    See NAP1L5 in Epigenomics, MapViewer

    Chromosome 4 - NC_000004.11Genomic Context describing neighboring genes Neighboring gene CD53 molecule pseudogene Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class Y Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene FAM13A antisense RNA 1 (non-protein coding) Neighboring gene family with sequence similarity 13, member A Neighboring gene uncharacterized LOC731282

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A human MAP kinase interactome. Bandyopadhyay S, et al. Nat Methods, 2010 Oct. PMID 20936779.
    2. Large copy-number variations are enriched in cases with moderate to extreme obesity. Wang K, et al. Diabetes, 2010 Oct. PMID 20622171.
    3. Expanding the substantial interactome of NEMO using protein microarrays. Fenner BJ, et al. PLoS One, 2010 Jan 20. PMID 20098747.
    4. Large-scale mapping of human protein-protein interactions by mass spectrometry. Ewing RM, et al. Mol Syst Biol, 2007. PMID 17353931.
    5. A screen for retrotransposed imprinted genes reveals an association between X chromosome homology and maternal germ-line methylation. Wood AJ, et al. PLoS Genet, 2007 Feb 9. PMID 17291163.

    See all (11) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    1. Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)
      Title: Large copy-number variations are enriched in cases with moderate to extreme obesity.
    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Nucleosome assembly protein 1-like 5 P54257 HAP1    HPRD  PubMed  
    Nucleosome assembly protein 1-like 5 Q92993 KAT5    HPRD  PubMed  
    Nucleosome assembly protein 1-like 5 Q9P2H0 KIAA1377    HPRD  PubMed  
    Nucleosome assembly protein 1-like 5 Q9Y383 LUC7L2    HPRD  PubMed  
    Nucleosome assembly protein 1-like 5 Q9H213 MAGEH1    HPRD  PubMed  
    Nucleosome assembly protein 1-like 5 P21246 PTN    HPRD  PubMed  
    BioGRID:129344 BioGRID:108040 DFFA    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:129344 BioGRID:109142 GRB2    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:114480 HAP1    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:114089 IKBKG    BioGRID  PubMed Reconstituted Complex 
    BioGRID:129344 BioGRID:115779 KAT5    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:121617 KIAA1377    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:119646 LUC7L2    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:118807 MAGEH1    BioGRID  PubMed Two-hybrid 
    BioGRID:129344 BioGRID:111731 PTN    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Genotypes

    Homology

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    nucleosome assembly protein 1-like 5
    Names
    nucleosome assembly protein 1-like 5
    down-regulated in liver malignancy
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153757.2 → NP_715638.1  nucleosome assembly protein 1-like 5

      Status: VALIDATED

      Source sequence(s)
      AC108065, DA041186, DB542768
      Consensus CDS
      CCDS3632.1
      UniProtKB/Swiss-Prot
      Q96NT1
      Related
      ENSP00000320488, OTTHUMP00000161563, ENST00000323061, OTTHUMT00000253551
      Conserved Domains (1) summary
      cl08298
      Location:67 – 119
      Blast Score: 90
      PTZ00007; (NAP-L) nucleosome assembly protein -L; Provisional

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000004.11 Reference GRCh37.p5 Primary Assembly

      Range
      89617066..89619023, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000136.1 Alternate HuRef

      Range
      85368983..85370940, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC108065.3 (33558..35471) None
    genomic CH471057.1 EAX06025.1
    mRNA AK054689.1 BAB70793.1
    mRNA AL834329.1 CAD38997.1
    mRNA BC022544.1 None
    mRNA BC039416.1 None
    mRNA BC104883.1 AAI04884.1
    mRNA DA041186.1 None
    mRNA DB542768.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8ND87 GenPept UniProtKB/TrEMBL:Q8ND87
    Q96NT1.1 GenPept UniProtKB/Swiss-Prot:Q96NT1
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
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