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    DIP1011 aldose 1-epimerase [ Corynebacterium diphtheriae NCTC 13129 ]

    Gene ID: 2650662, updated on 18-May-2013
    Gene symbol
    DIP1011
    Gene description
    aldose 1-epimerase
    Locus tag
    DIP1011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Corynebacterium diphtheriae NCTC 13129 (strain: NCTC13129)
    Lineage
    Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium
    Sequence :
    NC_002935.2 (984453..985370)

    NC_002935.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene sodium:solute symporter Neighboring gene hypothetical protein Neighboring gene galactose-1-phosphate uridylyltransferase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129. Cerdeño-Tárraga AM, et al. Nucleic Acids Res, 2003 Nov 15. PMID 14602910.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    aldose 1-epimerase
    NP_939373.1
    • Similar to aldose 1-epimerases e.g. Escherichia coli O157:H7 aldose-1-epimerase ECS4802 TR:BAB38225 (EMBL:AP002567) (300 aa) fasta scores: E(): 3.1e-21, 29.09% id in 299 aa, and to Escherichia coli hypothetical protein YihR or B3879 SW:YIHR_ECOLI (P32139) (308 aa) fasta scores: E(): 7.7e-21, 30.35% id in 280 aa, and to Salmonella typhimurium aldose-1-epimerase YihR TR:Q9L7R7 (EMBL:AF220438) (280 aa) fasta scores: E(): 1.1e-13, 29.53% id in 281 aa. Contains weak match to PFAM:PF01263 Aldose 1-epimerase E: 0.089

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002935.2

      Range
      984453..985370
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_939373.1 aldose 1-epimerase [Corynebacterium diphtheriae NCTC 13129]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6NHW9
      Conserved Domains (1) summary
      cd09022
      Location:22 – 298
      Blast Score: 853
      Aldose_epim_Ec_YihR; Aldose 1-epimerase, similar to Escherichia coli YihR
    Nucleotide Protein
    Heading Accession and Version
    genomic BX248356.1 CAE49531.1
    genomic BX248353.1 CAE49531.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

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