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Psma5 proteasome (prosome, macropain) subunit, alpha type 5 [ Mus musculus (house mouse) ]

Gene ID: 26442, updated on 28-May-2016
Official Symbol
Psma5provided by MGI
Official Full Name
proteasome (prosome, macropain) subunit, alpha type 5provided by MGI
Primary source
MGI:MGI:1347009
See related
Ensembl:ENSMUSG00000068749 Vega:OTTMUSG00000007299
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ZETA
Orthologs
Location:
3; 3 F3
Exon count:
9
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (108256926..108279952)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (108059844..108082870)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene ataxin 7-like 2 Neighboring gene synaptophysin-like 2 Neighboring gene predicted gene, 40123 Neighboring gene SIVA1, apoptosis-inducing factor pseudogene Neighboring gene predicted gene, 19343 Neighboring gene sortilin 1 Neighboring gene myosin binding protein H-like Neighboring gene predicted gene 12522

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC102091, MGC118067

Gene Ontology Provided by MGI

Function Evidence Code Pubs
endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
peptidase activity IEA
Inferred from Electronic Annotation
more info
 
threonine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
proteolysis IEA
Inferred from Electronic Annotation
more info
 
proteolysis involved in cellular protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
proteasome complex ISO
Inferred from Sequence Orthology
more info
 
proteasome core complex IDA
Inferred from Direct Assay
more info
PubMed 
proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
proteasome subunit alpha type-5
Names
macropain zeta chain
multicatalytic endopeptidase complex zeta chain
proteasome zeta chain
NP_036097.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011967.3NP_036097.1  proteasome subunit alpha type-5

    See identical proteins and their annotated locations for NP_036097.1

    Status: PROVISIONAL

    Source sequence(s)
    AK143468
    Consensus CDS
    CCDS17755.1
    UniProtKB/Swiss-Prot
    Q9Z2U1
    UniProtKB/TrEMBL
    Q3UPK6
    Related
    ENSMUSP00000088057, OTTMUSP00000007772, ENSMUST00000090569, OTTMUST00000016869
    Conserved Domains (2) summary
    PRK03996
    Location:8241
    PRK03996; proteasome subunit alpha; Provisional
    cd03753
    Location:8220
    proteasome_alpha_type_5; proteasome_alpha_type_5. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

    Range
    108256926..108279952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 Alternate Mm_Celera

    Range
    110590430..110613444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)