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ZNF337 zinc finger protein 337 [ Homo sapiens (human) ]

Gene ID: 26152, updated on 8-May-2016
Official Symbol
ZNF337provided by HGNC
Official Full Name
zinc finger protein 337provided by HGNC
Primary source
HGNC:HGNC:15809
See related
Ensembl:ENSG00000130684 HPRD:15779; Vega:OTTHUMG00000032131
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a zinc finger domain containing protein. The function of this protein has yet to be determined. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]
Orthologs
Location:
20p11.1
Exon count:
7
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 20 NC_000020.11 (25673195..25696904, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (25654744..25677515, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene ZNF337 antisense RNA 1 Neighboring gene N-acetylneuraminic acid phosphatase Neighboring gene mediator complex subunit 28 pseudogene 7 Neighboring gene uncharacterized LOC105372583 Neighboring gene vomeronasal 1 receptor 108 pseudogene

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Gene Expression, organism-specific biosystem (from REACTOME)
    Gene Expression, organism-specific biosystemGene Expression covers the pathways by which genomic DNA is transcribed to yield RNA, the regulation of these transcription processes, and the pathways by which newly-made RNA Transcripts are process...
  • Generic Transcription Pathway, organism-specific biosystem (from REACTOME)
    Generic Transcription Pathway, organism-specific biosystemOVERVIEW OF TRANSCRIPTION REGULATION: Detailed studies of gene transcription regulation in a wide variety of eukaryotic systems has revealed the general principles and mechanisms by which cell- or t...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_034058.1 RefSeqGene

    Range
    5001..28710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001290261.1NP_001277190.1  zinc finger protein 337

    See identical proteins and their annotated locations for NP_001277190.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK125455, AL031673, BC021298, BX113975
    Consensus CDS
    CCDS13174.1
    UniProtKB/Swiss-Prot
    Q9Y3M9
    UniProtKB/TrEMBL
    Q6ZUQ0
    Related
    ENSP00000365619, OTTHUMP00000030501, ENST00000376436, OTTHUMT00000078454
    Conserved Domains (5) summary
    cd07765
    Location:1251
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:1271
    KRAB; krueppel associated box
    COG5048
    Location:234626
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:390415
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:350370
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. NM_015655.3NP_056470.1  zinc finger protein 337

    See identical proteins and their annotated locations for NP_056470.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK291235, AL031673, BC021298, BP201424, BX113975
    Consensus CDS
    CCDS13174.1
    UniProtKB/Swiss-Prot
    Q9Y3M9
    UniProtKB/TrEMBL
    A8K5C0
    Related
    ENSP00000252979, OTTHUMP00000030502, ENST00000252979, OTTHUMT00000078455
    Conserved Domains (5) summary
    cd07765
    Location:1251
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:1271
    KRAB; krueppel associated box
    COG5048
    Location:234626
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:390415
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:350370
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p2 Primary Assembly

    Range
    25673195..25696904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005260702.2XP_005260759.1  

    See identical proteins and their annotated locations for XP_005260759.1

    UniProtKB/Swiss-Prot
    Q9Y3M9
    Conserved Domains (5) summary
    cd07765
    Location:1251
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:1252
    KRAB; krueppel associated box
    COG5048
    Location:202594
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:358383
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:318338
    ZF_C2H2; C2H2 Zn finger [structural motif]
  2. XM_011529219.1XP_011527521.1  

    See identical proteins and their annotated locations for XP_011527521.1

    UniProtKB/Swiss-Prot
    Q9Y3M9
    Conserved Domains (5) summary
    cd07765
    Location:1251
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:1271
    KRAB; krueppel associated box
    COG5048
    Location:234626
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:390415
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:350370
    ZF_C2H2; C2H2 Zn finger [structural motif]
  3. XM_006723558.2XP_006723621.1  

    See identical proteins and their annotated locations for XP_006723621.1

    UniProtKB/Swiss-Prot
    Q9Y3M9
    Conserved Domains (5) summary
    cd07765
    Location:1251
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:1271
    KRAB; krueppel associated box
    COG5048
    Location:234626
    COG5048; FOG: Zn-finger [General function prediction only]
    pfam13465
    Location:390415
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:350370
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate CHM1_1.1

Genomic

  1. NC_018931.2 Alternate CHM1_1.1

    Range
    25654047..25677765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)