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FAM169A family with sequence similarity 169 member A [ Homo sapiens (human) ]

Gene ID: 26049, updated on 26-May-2016
Official Symbol
FAM169Aprovided by HGNC
Official Full Name
family with sequence similarity 169 member Aprovided by HGNC
Primary source
HGNC:HGNC:29138
See related
Ensembl:ENSG00000198780 MIM:615769; Vega:OTTHUMG00000162930
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SLAP75
Orthologs
Location:
5q13.3
Exon count:
15
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 5 NC_000005.10 (74777574..74866838, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (74073399..74163832, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene hexosaminidase subunit beta Neighboring gene uncharacterized LOC105379038 Neighboring gene G elongation factor, mitochondrial 2 Neighboring gene NSA2, ribosome biogenesis homolog Neighboring gene actin related protein 2/3 complex subunit 1A pseudogene Neighboring gene uncharacterized LOC441086 Neighboring gene uncharacterized LOC105379039 Neighboring gene zinc finger protein 28 pseudogene

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • KIAA0888

Gene Ontology Provided by GOA

Component Evidence Code Pubs
nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
soluble lamin-associated protein of 75 kDa
Names
family with sequence similarity 169, member A
protein FAM169A
soluble lamina-associated protein of 75 kD

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015566.2NP_056381.1  soluble lamin-associated protein of 75 kDa

    See identical proteins and their annotated locations for NP_056381.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and is protein-coding.
    Source sequence(s)
    AB020695, AC093214, DA326879
    Consensus CDS
    CCDS43330.1
    UniProtKB/Swiss-Prot
    Q9Y6X4
    Related
    ENSP00000373808, OTTHUMP00000222941, ENST00000389156, OTTHUMT00000371092

RNA

  1. NR_046462.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) includes an alternate 5'-most exon and lacks an internal exon, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC093214, AK022981, BX640902, DB024270
    Related
    ENST00000510609, OTTHUMT00000371102

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p2 Primary Assembly

    Range
    74777574..74866838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005248480.1XP_005248537.1  

    See identical proteins and their annotated locations for XP_005248537.1

    UniProtKB/Swiss-Prot
    Q9Y6X4
  2. XM_011543307.1XP_011541609.1  

    See identical proteins and their annotated locations for XP_011541609.1

    UniProtKB/Swiss-Prot
    Q9Y6X4
  3. XM_011543306.1XP_011541608.1  

    See identical proteins and their annotated locations for XP_011541608.1

    UniProtKB/Swiss-Prot
    Q9Y6X4

Alternate CHM1_1.1

Genomic

  1. NC_018916.2 Alternate CHM1_1.1

    Range
    73506252..73595484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)