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DCAF13 DDB1 and CUL4 associated factor 13 [ Homo sapiens (human) ]

Gene ID: 25879, updated on 11-Sep-2014
Official Symbol
DCAF13provided by HGNC
Official Full Name
DDB1 and CUL4 associated factor 13provided by HGNC
Primary source
HGNC:HGNC:24535
Locus tag
HSPC064
See related
Ensembl:ENSG00000164934; HPRD:08528; Vega:OTTHUMG00000164888
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GM83; WDSOF1; HSPC064
See DCAF13 in Epigenomics, MapViewer
Location:
8q22.3
Exon count:
11
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 8 NC_000008.11 (103414714..103443453)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (104426942..104455681)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 6 Neighboring gene collagen triple helix repeat containing 1 Neighboring gene solute carrier family 25 (mitochondrial folate carrier), member 32 Neighboring gene mediator complex subunit 21 pseudogene Neighboring gene regulating synaptic membrane exocytosis 2 Neighboring gene TAR (HIV-1) RNA binding protein 2 pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC126859, MGC138247, DKFZp564O0463

Gene Ontology Provided by GOA

Function Evidence Code Pubs
poly(A) RNA binding IDA
Inferred from Direct Assay
more info
 
Process Evidence Code Pubs
protein ubiquitination IC
Inferred by Curator
more info
PubMed 
protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 
rRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Cul4-RING E3 ubiquitin ligase complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
DDB1- and CUL4-associated factor 13
Names
DDB1- and CUL4-associated factor 13
WD repeats and SOF1 domain containing
WD repeat and SOF domain-containing protein 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015420.6NP_056235.4  DDB1- and CUL4-associated factor 13

    Status: VALIDATED

    Source sequence(s)
    AC012213, AK027799, CA429438
    Consensus CDS
    CCDS34934.1
    UniProtKB/Swiss-Prot
    Q9NV06
    Related
    ENSP00000297579, OTTHUMP00000227826, ENST00000297579, OTTHUMT00000380797
    Conserved Domains (3) summary
    COG2319
    Location:152512
    Blast Score: 337
    COG2319; FOG: WD40 repeat [General function prediction only]
    cd00200
    Location:211505
    Blast Score: 377
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam04158
    Location:506587
    Blast Score: 375
    Sof1; Sof1-like domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000008.11 

    Range
    103414714..103443453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate HuRef

Genomic

  1. AC_000140.1 

    Range
    99627291..99656018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018919.2 

    Range
    104467741..104496445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)