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    nup155 nucleoporin Nup155 [ Schizosaccharomyces pombe 972h- ]

    Gene ID: 2543502, updated on 2-May-2013
    Gene symbol
    nup155
    Gene description
    nucleoporin Nup155
    Locus tag
    SPAC890.06
    Gene type
    protein coding
    RNA name
    nucleoporin Nup155
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe 972h- (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    nup157; nup170
    Location :
    chromosome: I
    Sequence :
    Chromosome: I; NC_003424.3 (5011683..5016066)
    See nup155 in MapViewer

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene serine/threonine protein kinase Ppk16 (predicted) Neighboring gene ribosome biogenesis protein Ytm1 (predicted) Neighboring gene ribosome biogenesis protein, G-pathc domain, PINX1 family (predicted) Neighboring gene miscRNA Neighboring gene type I protein arginine N-methyltransferase Rmt1 Neighboring gene miscRNA Neighboring gene 60S ribosomal protein L31

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372.
    2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360.

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • RNA transport, organism-specific biosystem (from KEGG)
      RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
    • RNA transport, conserved biosystem (from KEGG)
      RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...

    Homology

    3'UTR

    • Loc: 5015787-5016066

    5'UTR

    • Loc: 5011683-5011731

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    nucleocytoplasmic transport IC
    Inferred by Curator
    more info
    		  
    rRNA export from nucleus ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nuclear envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nuclear pore IDA
    Inferred from Direct Assay
    more info
    		  
    nuclear pore ISO
    Inferred from Sequence Orthology
    more info
    		  
    Names
    nucleoporin Nup155

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3

      Range
      5011683..5016066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020253.2 → NP_594824.1  nucleoporin Nup155 [Schizosaccharomyces pombe 972h-]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9URX8
      Conserved Domains (2) summary
      COG5308
      Location:1 – 1308
      Blast Score: 4447
      NUP170; Nuclear pore complex subunit [Intracellular trafficking and secretion]
      pfam03177
      Location:662 – 1176
      Blast Score: 787
      Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
    Nucleotide Protein
    Heading Accession and Version
    genomic CU329670.1 CAB63497.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9URX8.3 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • HomoloGene
        Links between HomoloGene and Gene are provided by the HomoloGene group when a gene is included in a HomoloGene record.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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