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pms1 MutL family mismatch-repair protein Pms1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542582, updated on 15-Mar-2024

Summary

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Gene symbol
pms1
Gene description
MutL family mismatch-repair protein Pms1
Locus tag
SPAC19G12.02c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003424.3 (4044821..4049384, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S0B Neighboring gene putative U2 snRNP-associated protein Sap130 Neighboring gene anaphase-promoting complex subunit Apc4 Neighboring gene chitin deacetylase Cda1 Neighboring gene putative ureidoglycolate hydrolase Neighboring gene miscRNA Neighboring gene putative citrate transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mismatch repair in Schizosaccharomyces pombe requires the mutL homologous gene pms1: molecular cloning and functional analysis. Schär P, et al. Genetics, 1997 Aug. PMID 9258673, Free PMC Article
  2. Involvement of nucleotide-excision repair in msh2 pms1-independent mismatch repair. Fleck O, et al. Nat Genet, 1999 Mar. PMID 10080187
  3. Schizosaccharomyces pombe exo1 is involved in the same mismatch repair pathway as msh2 and pms1. Rudolph C, et al. Curr Genet, 1998 Dec. PMID 9871115
  4. Different frameshift mutation spectra in non-repetitive DNA of MutSalpha- and MutLalpha-deficient fission yeast cells. Marti TM, et al. DNA Repair (Amst), 2003 May 13. PMID 12713814
  5. Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Mansour AA, et al. Genetics, 2001 May. PMID 11333219, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding ISO
Inferred from Sequence Orthology
more info
  
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
  
enables mismatched DNA binding NAS
Non-traceable Author Statement
more info
  
Process Evidence Code Pubs
involved_in maintenance of DNA repeat elements IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in meiotic mismatch repair IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in mismatch repair IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mismatch repair IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
part_of MutLalpha complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nuclear chromosome ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
MutL family mismatch-repair protein Pms1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4044821..4049384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356149.1 → NP_001342828.1  MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P54280
    Conserved Domains (1) summary
    COG0323
    Location:1 → 793
    MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
Nucleotide Protein
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