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SPACUNK4.16c putative alpha,alpha-trehalose-phosphate synthase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542498, updated on 15-Mar-2024

Summary

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Gene symbol
SPACUNK4.16c
Gene description
putative alpha,alpha-trehalose-phosphate synthase
Primary source
PomBase:SPACUNK4.16c
Locus tag
SPACUNK4.16c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SPACUNK4.16c in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2877422..2880590)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene pyruvyl transferase Pvg1 Neighboring gene miscRNA Neighboring gene NAD-binding dehydrogenase family protein Neighboring gene protein mug153 Neighboring gene putative 2',3'-cyclic-nucleotide 3'-phosphodiesterase Neighboring gene BRCT domain protein Neighboring gene putative NTPase Ylf2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. Nie M, et al. J Biol Chem, 2012 Aug 24. PMID 22730331, Free PMC Article
  2. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
  3. Systematic analysis reveals the prevalence and principles of bypassable gene essentiality. Li J, et al. Nat Commun, 2019 Mar 1. PMID 30824696, Free PMC Article
  4. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
  5. Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast. Roguev A, et al. Science, 2008 Oct 17. PMID 18818364, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
contributes_to trehalose-phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in trehalose metabolism in response to stress IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cytosol HDA PubMed 

General protein information

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Preferred Names
putative alpha,alpha-trehalose-phosphate synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2877422..2880590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019389.2 → NP_593962.1  putative alpha,alpha-trehalose-phosphate synthase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593962.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14081
    Conserved Domains (4) summary
    cd03788
    Location:187 → 646
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    COG1877
    Location:663 → 944
    OtsB; Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
    pfam00982
    Location:173 → 652
    Glyco_transf_20; Glycosyltransferase family 20
    pfam02358
    Location:684 → 929
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
Heading Accession and Version

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