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ypt3 GTPase Ypt3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542219, updated on 7-Apr-2024

Summary

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Gene symbol
ypt3
Gene description
GTPase Ypt3
Primary source
PomBase:SPAC18G6.03
Locus tag
SPAC18G6.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See ypt3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003424.3 (2215635..2217134)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene chromodomain protein Chp1 Neighboring gene tRNA-Val Neighboring gene miscRNA Neighboring gene putative serine hydroxymethyltransferase Shm2 Neighboring gene putative translation elongation regulator Gcn1 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Role of the Rab GTP-binding protein Ypt3 in the fission yeast exocytic pathway and its connection to calcineurin function. Cheng H, et al. Mol Biol Cell, 2002 Aug. PMID 12181359, Free PMC Article
  2. Cation diffusion facilitator Cis4 is implicated in Golgi membrane trafficking via regulating zinc homeostasis in fission yeast. Fang Y, et al. Mol Biol Cell, 2008 Apr. PMID 18199682, Free PMC Article
  3. Genetic and functional interaction between Ryh1 and Ypt3: two Rab GTPases that function in S. pombe secretory pathway. He Y, et al. Genes Cells, 2006 Mar. PMID 16483310
  4. Identification of ras-related, YPT family genes in Schizosaccharomyces pombe. Miyake S, et al. EMBO J, 1990 May. PMID 2328721, Free PMC Article
  5. Local Pheromone Release from Dynamic Polarity Sites Underlies Cell-Cell Pairing during Yeast Mating. Merlini L, et al. Curr Biol, 2016 Apr 25. PMID 27020743, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables GTP binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in ascospore-type prospore membrane formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in exocytosis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in exocytosis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in intracellular protein transport TAS
Traceable Author Statement
more info
 PubMed 
involved_in membrane addition at site of mitotic cytokinesis EXP
Inferred from Experiment
more info
 PubMed 
involved_in mitotic cytokinesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein localization to cell cortex of cell tip IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein localization to meiotic spindle pole body IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in vacuole fusion, non-autophagic IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cleavage furrow leading edge IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cortical dynamic polarity patch IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol HDA PubMed 
is_active_in meiotic spindle pole IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus HDA PubMed 
is_active_in prospore membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in recycling endosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
GTPase Ypt3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2215635..2217134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001356053.1 → NP_001342809.1  GTPase Ypt3 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P17610
    Conserved Domains (1) summary
    cd01868
    Location:8 → 172
    Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
Nucleotide Protein
Heading Accession and Version

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