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rps23 40S ribosomal protein S23 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542012, updated on 15-Mar-2024

Summary

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Gene symbol
rps23
Gene description
40S ribosomal protein S23
Primary source
PomBase:SPAC23C11.02c
Locus tag
SPAC23C11.02c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rps23 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2135328..2135841, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative ATP-dependent RNA helicase Neighboring gene miscRNA Neighboring gene putative ubiquitin-protein ligase E4 Neighboring gene family protein ICE2 Neighboring gene Rho family GTPase Rho5 Neighboring gene putative U3 snoRNP-associated protein Mpp1 Neighboring gene DNA kinase/phosphatase Pnk1 Neighboring gene putative inorganic pyrophosphatase Neighboring gene hydrolase Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prolyl dihydroxylation of unassembled uS12/Rps23 regulates fungal hypoxic adaptation. Clasen SJ, et al. Elife, 2017 Oct 30. PMID 29083304, Free PMC Article
  2. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  3. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
  4. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of SREBP signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleolus HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
40S ribosomal protein S23

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2135328..2135841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019064.2 → NP_593633.1  40S ribosomal protein S23 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593633.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CT75, P0CT76, P79057
    Conserved Domains (1) summary
    PTZ00067
    Location:1 → 143
    PTZ00067; 40S ribosomal S23; Provisional
Nucleotide Protein
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