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SPCC1450.09c putative phospholipase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2539134, updated on 11-Apr-2024

Summary

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Gene symbol
SPCC1450.09c
Gene description
putative phospholipase
Primary source
PomBase:SPCC1450.09c
Locus tag
SPCC1450.09c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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Location:
chromosome: III
Exon count:
2
Sequence:
Chromosome: III; NC_003421.2 (1741202..1745250, complement)

Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene putative D-amino acid oxidase Neighboring gene wtf element Wtf16 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative iron hydrogenase Neighboring gene serine/threonine protein kinase Cek1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003421.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
  2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidyl phospholipase B activity IEA
Inferred from Electronic Annotation
more info
  
enables phospholipase A2 activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in external side of plasma membrane IC
Inferred by Curator
more info
  
is_active_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
is_active_in fungal-type cell wall ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
putative phospholipase
NP_001342884.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003421.2 Reference assembly

    Range
    1741202..1745250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001355933.1 → NP_001342884.1  putative phospholipase [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7N6
    Conserved Domains (1) summary
    cd07203
    Location:63 → 610
    cPLA2_Fungal_PLB; Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain
Nucleotide Protein
Heading Accession and Version

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