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    FYN FYN oncogene related to SRC, FGR, YES [ Homo sapiens ]

    Gene ID: 2534, updated on 19-May-2012

    Summary

    Official Symbol
    FYNprovided by HGNC
    Official Full Name
    FYN oncogene related to SRC, FGR, YESprovided by HGNC
    Primary source
    HGNC:4037
    Locus tag
    RP1-66H14.1
    See related
    Ensembl:ENSG00000010810; HPRD:00655; MIM:137025; Vega:OTTHUMG00000016305
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SLK; SYN; p59-FYN; MGC45350
    Summary
    This gene is a member of the protein-tyrosine kinase oncogene family. It encodes a membrane-associated tyrosine kinase that has been implicated in the control of cell growth. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and interacts with the fyn-binding protein. Alternatively spliced transcript variants encoding distinct isoforms exist. [provided by RefSeq, Jul 2008]

    Genomic context

    Location :
    6q21
    Sequence :
    Chromosome: 6; NC_000006.11 (111982479..112194655, complement)

    Chromosome 6 - NC_000006.11Genomic Context describing neighboring genes Neighboring gene REV3-like, polymerase (DNA directed), zeta, catalytic subunit Neighboring gene TRAF3IP2 antisense RNA 1 (non-protein coding) Neighboring gene bromodomain containing 7 pseudogene 4 Neighboring gene TRAF3 interacting protein 2 Neighboring gene uncharacterized LOC100506389 Neighboring gene WNT1 inducible signaling pathway protein 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    HIV-1 protein interactions

    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env Interaction of HIV-1 gp120 with CD4 leads to increased levels of phosphorylation of the src-family Lck and Fyn protein tyrosine kinases and enhancement of their activities PubMed
    Envelope surface glycoprotein gp160, precursor env Pretreatment of cells with HIV-1 gp160 results in marked inhibition of tyrosine phosphorylation of p59(fyn), PLC-gamma1, ras activation, and TNF-alpha secretion in anti-CD3 mAb activated CD4+ T cells PubMed
    Envelope transmembrane glycoprotein gp41 env HIV-1 gp120 and gp41-induced cell killing is accompanied by tyrosine phosphorylation and activation of the CD4-associated p56(Lck) kinase, and by activation of a second member of the scr family of protein tyrosine kinases, p59(fyn) kinase PubMed
    Nef nef The single amino acid residue number 96 in the SH3 domain of Fyn regulates its affinity and specificity in binding to HIV-1 Nef PubMed
    nef Crystal structure studies reveal the conserved PXXP sequence motif of HIV-1 Nef is part of a polyproline type II helix that is required for Nef binding to the SH3 domain of Fyn PubMed
    nef HIV-1 Nef binds to the SH3 domain of Fyn through its proline-rich (PXXP) motifs between amino acid residues 65 and 82; this binding enhances viral replication but not down-regulation of CD4 PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_002028.1 NP_751927.1 HCVgp1    BIND  PubMed NS5A interacts with Fyn. 
    NP_002028.1 NP_112553.1 HNRNPK    BIND  PubMed Fyn interacts with hnRNPK. This interaction was modeled on a demonstrated interaction between Fyn from an unspecified source and human hnRNPK. 
    NP_002028.1 AAC00042.1 PDE4D    BIND  PubMed PDE4D4 interacts with Fyn SH3 domain. 
    NP_002028.1 NP_003736.1 SOCS1    BIND  PubMed Socs1 interacts with Fyn. This interaction was modeled on a demonstrated interaction between mouse Socs1 and Fyn from an unspecified species. 
    P06241 P24666 ACP1    HPRD  PubMed  
    P06241 Q13444 ADAM15    HPRD  PubMed  
    P06241 P35612 ADD2    HPRD  PubMed  
    P06241 RICS ARHGAP32    HPRD  PubMed  
    P06241 O14559 ARHGAP33    HPRD  PubMed  
    P06241 P54253 ATXN1    HPRD  PubMed  
    P06241 P56945 BCAR1    HPRD  PubMed  
    P06241 P20749 BCL3    HPRD  PubMed  
    P06241 P42574 CASP3    HPRD  PubMed  
    P06241 Q14790 CASP8    HPRD  PubMed  
    P06241 Q03135 CAV1    HPRD  PubMed  
    P06241 P22681 CBL    HPRD  PubMed  
    P06241 Q13191 CBLB    HPRD  PubMed  
    P06241 P15391 CD19    HPRD  PubMed  
    P06241 P06729 CD2    HPRD  PubMed  
    P06241 Q15762 CD226    HPRD  PubMed  
    P06241 P20963 CD247    HPRD  PubMed  
    P06241 Q9Y5K6 CD2AP    HPRD  PubMed  
    P06241 P16671 CD36    HPRD  PubMed  
    P06241 P16070 CD44    HPRD  PubMed  
    P06241 P09326 CD48    HPRD  PubMed  
    P06241 P06127 CD5    HPRD  PubMed  
    P06241 P08174 CD55    HPRD  PubMed  
    P06241 P11912 CD79A    HPRD  PubMed  
    P06241 P40259 CD79B    HPRD  PubMed  
    P06241 P06493 CDK1    HPRD  PubMed  
    P06241 Q00535 CDK5    HPRD  PubMed  
    P06241 P51911 CNN1    HPRD  PubMed  
    P06241 Q15417 CNN3    HPRD  PubMed  
    P06241 Q12860 CNTN1    HPRD  PubMed  
    P06241 P78357 CNTNAP1    HPRD  PubMed  
    P06241 P46108 CRK    HPRD  PubMed  
    P06241 P07333 CSF1R    HPRD  PubMed  
    P06241 P32927 CSF2RB    HPRD  PubMed  
    P06241 P41240 CSK    HPRD  PubMed  
    P06241 P16410 CTLA4    HPRD  PubMed  
    P06241 P35222 CTNNB1    HPRD  PubMed  
    P06241 Q9UQB3 CTNND2    HPRD  PubMed  
    P06241 P78352 DLG4    HPRD  PubMed  
    P06241 Q99704 DOK1    HPRD  PubMed  
    P06241 Q7L591 DOK3    HPRD  PubMed  
    P06241 Q8TEW6 DOK4    HPRD  PubMed  
    P06241 P54764 EPHA4    HPRD  PubMed  
    P06241 P29322 EPHA8    HPRD  PubMed  
    P06241 P54753 EPHB3    HPRD  PubMed  
    P06241 Q9UI08 EVL    HPRD  PubMed  
    P06241 P25445 FAS    HPRD  PubMed  
    P06241 P48023 FASLG    HPRD  PubMed  
    P06241 P06734 FCER2    HPRD  PubMed  
    P06241 P12318 FCGR2A    HPRD  PubMed  
    P06241 O75955 FLOT1    HPRD  PubMed  
    P06241 Q14254 FLOT2    HPRD  PubMed  
    P06241 P17948 FLT1    HPRD  PubMed  
    P06241 FNBP4 FNBP4    HPRD  PubMed  
    P06241 O15117 FYB    HPRD  PubMed  
    P06241 GRB2 associated binding protein 3 GAB3    HPRD  PubMed  
    P06241 P63244 GNB2L1    HPRD  PubMed  
    P06241 Q9HCN6 GP6    HPRD  PubMed  
    P06241 Q13588 GRAP    HPRD  PubMed  
    P06241 Q13322 GRB10    HPRD  PubMed  
    P06241 P62993 GRB2    HPRD  PubMed  
    P06241 Q12879 GRIN2A    HPRD  PubMed  
    P06241 Q13224 GRIN2B    HPRD  PubMed  
    P06241 P61978 HNRNPK    HPRD  PubMed  
    P06241 P01112 HRAS    HPRD  PubMed  
    P06241 P07900 HSP90AA1    HPRD  PubMed  
    P06241 P50406 HTR6    HPRD  PubMed  
    P06241 P14784 IL2RB    HPRD  PubMed  
    P06241 P16871 IL7R    HPRD  PubMed  
    P06241 P35568 IRS1    HPRD  PubMed  
    P06241 P16144 ITGB4    HPRD  PubMed  
    P06241 Q08881 ITK    HPRD  PubMed  
    P06241 Q14643 ITPR1    HPRD  PubMed  
    P06241 O60674 JAK2    HPRD  PubMed  
    P06241 P14923 JUP    HPRD  PubMed  
    P06241 P35968 KDR    HPRD  PubMed  
    P06241 Q07666 KHDRBS1    HPRD  PubMed  
    P06241 P10721 KIT    HPRD  PubMed  
    P06241 Q13094 LCP2    HPRD  PubMed  
    P06241 P20916 MAG    HPRD  PubMed  
    P06241 P11137 MAP2    HPRD  PubMed  
    P06241 P10636 MAPT    HPRD  PubMed  
    P06241 P43121 MCAM    HPRD  PubMed  
    P06241 Q9H204 MED28    HPRD  PubMed  
    P06241 P11836 MS4A1    HPRD  PubMed  
    P06241 P13591 NCAM1    HPRD  PubMed  
    P06241 Q14511 NEDD9    HPRD  PubMed  
    P06241 P30419 NMT1    HPRD  PubMed  
    P06241 O60500 NPHS1    HPRD  PubMed  
    P06241 P04150 NR3C1    HPRD  PubMed  
    P06241 Q16620 NTRK2    HPRD  PubMed  
    P06241 Q9NWQ8 PAG1    HPRD  PubMed  
    P06241 Q13177 PAK2    HPRD  PubMed  
    P06241 P09619 PDGFRB    HPRD  PubMed  
    P06241 P16284 PECAM1    HPRD  PubMed  
    P06241 P27986 PIK3R1    HPRD  PubMed  
    P06241 O00459 PIK3R2    HPRD  PubMed  
    P06241 Q03405 PLAUR    HPRD  PubMed  
    P06241 P19174 PLCG1    HPRD  PubMed  
    P06241 P16885 PLCG2    HPRD  PubMed  
    P06241 O14939 PLD2    HPRD  PubMed  
    P06241 Q05655 PRKCD    HPRD  PubMed  
    P06241 Q02156 PRKCE    HPRD  PubMed  
    P06241 P24723 PRKCH    HPRD  PubMed  
    P06241 Q04759 PRKCQ    HPRD  PubMed  
    P06241 Q05513 PRKCZ    HPRD  PubMed  
    P06241 Q05397 PTK2    HPRD  PubMed  
    P06241 Q14289 PTK2B    HPRD  PubMed  
    P06241 Q06124 PTPN11    HPRD  PubMed  
    P06241 P54829 PTPN5    HPRD  PubMed  
    P06241 P18433 PTPRA    HPRD  PubMed  
    P06241 P08575 PTPRC    HPRD  PubMed  
    P06241 P23469 PTPRE    HPRD  PubMed  
    P06241 P10586 PTPRF    HPRD  PubMed  
    P06241 P23471 PTPRZ1    HPRD  PubMed  
    P06241 P49023 PXN    HPRD  PubMed  
    P06241 P04049 RAF1    HPRD  PubMed  
    P06241 O75056 SDC3    HPRD  PubMed  
    P06241 O14492 SH2B2    HPRD  PubMed  
    P06241 O60880 SH2D1A    HPRD  PubMed  
    P06241 P78314 SH3BP2    HPRD  PubMed  
    P06241 P29353 SHC1    HPRD  PubMed  
    P06241 Q9Y3P8 SIT1    HPRD  PubMed  
    P06241 Q86WV1 SKAP1    HPRD  PubMed  
    P06241 O75563 SKAP2    HPRD  PubMed  
    P06241 Q13291 SLAMF1    HPRD  PubMed  
    P06241 P37840 SNCA    HPRD  PubMed  
    P06241 O15524 SOCS1    HPRD  PubMed  
    P06241 Q07889 SOS1    HPRD  PubMed  
    P06241 Q9NYA1 SPHK1    HPRD  PubMed  
    P06241 Q9NRA0 SPHK2    HPRD  PubMed  
    P06241 P16150 SPN    HPRD  PubMed  
    P06241 P42224 STAT1    HPRD  PubMed  
    P06241 P43405 SYK    HPRD  PubMed  
    P06241 P04216 THY1    HPRD  PubMed  
    P06241 Q07912 TNK2    HPRD  PubMed  
    P06241 O75674 TOM1L1    HPRD  PubMed  
    P06241 Q6PIZ9 TRAT1    HPRD  PubMed  
    P06241 Q9Y210 TRPC6    HPRD  PubMed  
    P06241 Q9HBA0 TRPV4    HPRD  PubMed  
    P06241 P68363 TUBA1B    HPRD  PubMed  
    P06241 Q13748 TUBA3C    HPRD  PubMed  
    P06241 P68366 TUBA4A    HPRD  PubMed  
    P06241 P42681 TXK    HPRD  PubMed  
    P06241 P29597 TYK2    HPRD  PubMed  
    P06241 Q06418 TYRO3    HPRD  PubMed  
    P06241 Q13432 UNC119    HPRD  PubMed  
    P06241 P15498 VAV1    HPRD  PubMed  
    P06241 P42768 WAS    HPRD  PubMed  
    P06241 Q92558 WASF1    HPRD  PubMed  
    P06241 Q8IV90 WASF2    HPRD  PubMed  
    P06241 Q96MU7 YTHDC1    HPRD  PubMed  
    P06241 P43403 ZAP70    HPRD  PubMed  
    P06241 Thy1 cotranscribed     HPRD  PubMed  
    BioGRID:108810 BioGRID:114287 ADAM15    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:106632 ADD2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:115091 ARHGAP32    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:108810 BioGRID:114934 BCAR1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:108810 BioGRID:107074 BCL3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:107160 BTK    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:122489 C7orf25    BioGRID  PubMed Two-hybrid 
    BioGRID:108810 BioGRID:122420 C8orf33    BioGRID  PubMed Two-hybrid 
    BioGRID:108810 BioGRID:107315 CBL    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:108810 BioGRID:117156 CBLC    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:107352 CD2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:115908 CD226    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107386 CD36    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107355 CD3G    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107398 CD44    BioGRID  PubMed Affinity Capture-Western; Co-fractionation 
    BioGRID:108810 BioGRID:107434 CDH1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:107420 CDK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107561 CHRNA7    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107823 CSF1R    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:107832 CSK    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107875 CTLA4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107880 CTNNB1    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:107881 CTNND1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:108810 BioGRID:107975 DAG1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    NP_005206.1 DCC    BIND  PubMed DCC interacts with Fyn. 
    BioGRID:108810 BioGRID:108086 DLG4    BioGRID  PubMed Affinity Capture-Western 
    NP_060580.2 DOK4    BIND  PubMed IRS5/DOK4 interacts with Fyn. This interaction was modelled on a demonstrated interaction between human IRS5/DOK4 and hamster Fyn. 
    BioGRID:108810 BioGRID:108356 EPHA3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:108357 EPHA4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:108360 EPHA8    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:108363 EPHB3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:199397 Efs    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:106851 FAS    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:106852 FASLG    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:116941 FNBP4    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:108809 FYB    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:108810 FYN    BioGRID  PubMed Co-crystal Structure 
    BioGRID:108810 BioGRID:126581 GAB3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:115671 GNB2L1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:119379 GP6    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:109144 GRB10    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:109160 GRIN2A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:109161 GRIN2B    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:109552 HSP90AA1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:109789 IL7R    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:123747 ITCH    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:109907 ITK    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:109920 JAK2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:115900 KHDRBS1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:110273 MAG    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:110305 MAP2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:110308 MAPT    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:110332 MCAM    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:107369 MS4A1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:228045 Mta1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:228046 Mta3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:120074 NDFIP2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:110811 NEDD4    BioGRID  PubMed Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:110816 NEDD9    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:110899 NMT1    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:110928 NPHS1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:109165 NR3C1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:110970 NTRK2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:247522 Nedd4    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:120931 PAG1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:111201 PECAM1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:111313 PIK3R1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:111314 PIK3R2    BioGRID  PubMed Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:111352 PLCG2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:111574 PRKCQ    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex; Two-hybrid 
    BioGRID:108810 BioGRID:111719 PTK2    BioGRID  PubMed Affinity Capture-Western; Co-crystal Structure 
    BioGRID:108810 BioGRID:108480 PTK2B    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:111745 PTPN11    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:124312 PTPN5    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:111750 PTPRA    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:111787 PXN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:111831 RAF1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:112054 RPL10    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:115027 SDC3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:110246 SH2D1A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:112350 SH3BP2    BioGRID  PubMed Two-hybrid 
    BioGRID:108810 BioGRID:118088 SIT1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:114184 SKAP1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:114448 SKAP2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:112395 SLAMF1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:112506 SNCA    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:114203 SOCS1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:112537 SOS1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:112592 SRC    BioGRID  PubMed Protein-peptide 
    BioGRID:108810 BioGRID:112717 SYK    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:112926 THY1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:112986 TNFRSF1A    BioGRID  PubMed Co-fractionation 
    BioGRID:108810 BioGRID:115485 TNK2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:112992 TNNT1    BioGRID  PubMed Two-hybrid 
    BioGRID:108810 BioGRID:115352 TOM1L1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:119154 TRAT1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:108810 BioGRID:113076 TRPC6    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:121883 TRPV4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:113129 TUBA3C    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:113148 TYK2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:214351 Trim69    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108810 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:108810 BioGRID:125434 UHRF2    BioGRID  PubMed Far Western 
    BioGRID:108810 BioGRID:114548 UNC119    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:108810 BioGRID:113252 VAV1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:113293 WAS    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:108810 BioGRID:113357 YES1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108810 BioGRID:124871 YTHDC1    BioGRID  PubMed Biochemical Activity 
    BioGRID:108810 BioGRID:113367 ZAP70    BioGRID  PubMed Affinity Capture-Western; Phenotypic Enhancement 
    BioGRID:108810 BioGRID:1205545 nef    BioGRID  PubMed Co-crystal Structure; Reconstituted Complex 

    General gene information

    Markers

    Homology

    Pathways from BioSystems

    • Adaptive Immune System, organism-specific biosystem (from REACTOME)
      Adaptive Immune System, organism-specific biosystemAdaptive immunity refers to antigen-specific immune response efficiently involved in clearing the pathogens. The adaptive immune system is comprised of B and T lymphocytes that express receptors with...
    • Adherens junction, organism-specific biosystem (from KEGG)
      Adherens junction, organism-specific biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
    • Adherens junction, conserved biosystem (from KEGG)
      Adherens junction, conserved biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
    • Alpha-synuclein signaling, organism-specific biosystem (from Pathway Interaction Database)
      Alpha-synuclein signaling, organism-specific biosystem
      Alpha-synuclein signaling
    • Alpha6-Beta4 Integrin Signaling Pathway, organism-specific biosystem (from WikiPathways)
      Alpha6-Beta4 Integrin Signaling Pathway, organism-specific biosystem"Integrins are cell surface heterodimeric protein complex consisting of one alpha and one beta chain. Integrins act as cell adhesion molecules as well as participate in cellular signaling. The ligand...
    • Angiopoietin receptor Tie2-mediated signaling, organism-specific biosystem (from Pathway Interaction Database)
      Angiopoietin receptor Tie2-mediated signaling, organism-specific biosystem
      Angiopoietin receptor Tie2-mediated signaling
    • Antigen Activates B Cell Receptor Leading to Generation of Second Messengers, organism-specific biosystem (from REACTOME)
      Antigen Activates B Cell Receptor Leading to Generation of Second Messengers, organism-specific biosystemMature B cells express IgM and IgD immunoglobulins which are complexed with Ig-alpha (CD79A, MB-1) and Ig-beta (CD79B, B29) to form the B cell receptor (BCR) (Fu et al. 1974, Fu et al. 1975, Kunkel e...
    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, organism-specific biosystem (from REACTOME)
      Axon guidance, organism-specific biosystemAxon guidance / axon pathfinding is the process by which neurons send out axons to reach the correct targets. Growing axons have a highly motile structure at the growing tip called the growth cone, w...
    • B Cell Receptor Signaling Pathway, organism-specific biosystem (from WikiPathways)
      B Cell Receptor Signaling Pathway, organism-specific biosystemThe B cell receptor includes membrane ?? heavy chain molecules bound to a light chain and an Ig alpha (CD79A)/Ig beta (CD79B) heterodimer. Activation of the B cell receptor involves phosphorylation o...
    • CD28 co-stimulation, organism-specific biosystem (from REACTOME)
      CD28 co-stimulation, organism-specific biosystemIn naive T cells, CD28 costimulation enhances cell cycle entry, potently stimulates expression of both the mitogenic lymphokine interleukin-2 (IL-2) and its receptor, and stimulates the activation o...
    • CD28 dependent PI3K/Akt signaling, organism-specific biosystem (from REACTOME)
      CD28 dependent PI3K/Akt signaling, organism-specific biosystemPI3Ks can be activated by a number of different receptors, including the TcR (T cell receptor), co-stimulatory receptors (CD28), cytokine receptors and chemokine receptors. However, the specific role...
    • CD28 dependent Vav1 pathway, organism-specific biosystem (from REACTOME)
      CD28 dependent Vav1 pathway, organism-specific biosystemCD28 binds to several intracellular proteins including PI3 kinase, Grb-2, Gads and ITK. Grb-2 specifically co-operates with Vav-1 in the up-regulation of NFAT/AP-1 transcription. CD28 costimulation r...
    • CRMPs in Sema3A signaling, organism-specific biosystem (from REACTOME)
      CRMPs in Sema3A signaling, organism-specific biosystemCRMPs are a small family of plexinA-interacting cytosolic phosphoproteins identified as mediators of Sema3A signaling and neuronal differentiation. After Sema3A activation Plexin-A bound CRMP's under...
    • CTLA4 inhibitory signaling, organism-specific biosystem (from REACTOME)
      CTLA4 inhibitory signaling, organism-specific biosystemCTLA4 is one of the best studied inhibitory receptors of the CD28 superfamily. CTLA4 inhibits Tcell activation by reducing IL2 production and IL2 expression, and by arresting T cells at the G1 phase ...
    • CXCR4-mediated signaling events, organism-specific biosystem (from Pathway Interaction Database)
      CXCR4-mediated signaling events, organism-specific biosystem
      CXCR4-mediated signaling events
    • Cell surface interactions at the vascular wall, organism-specific biosystem (from REACTOME)
      Cell surface interactions at the vascular wall, organism-specific biosystemLeukocyte extravasation is a rigorously controlled process that guides white cell movement from the vascular lumen to sites of tissue inflammation. The powerful adhesive interactions that are require...
    • Cell-Cell communication, organism-specific biosystem (from REACTOME)
      Cell-Cell communication, organism-specific biosystemCell-to-Cell communication is crucial for multicellular organisms because it allows organisms to coordinate the activity of their cells. Some cell-to-cell communication requires direct cell-cell cont...
    • Cholinergic synapse, organism-specific biosystem (from KEGG)
      Cholinergic synapse, organism-specific biosystemAcetylcholine (ACh) is a neurotransmitter widely distributed in the central (and also peripheral, autonomic and enteric) nervous system (CNS). In the CNS, ACh facilitates many functions, such as lear...
    • Class I PI3K signaling events, organism-specific biosystem (from Pathway Interaction Database)
      Class I PI3K signaling events, organism-specific biosystem
      Class I PI3K signaling events
    • Costimulation by the CD28 family, organism-specific biosystem (from REACTOME)
      Costimulation by the CD28 family, organism-specific biosystemOptimal activation of T-lymphocytes requires at least two signals. A primary one is delivered by the T-cell receptor (TCR) complex after antigen recognition and additional costimulatory signals are d...
    • Cytokine Signaling in Immune system, organism-specific biosystem (from REACTOME)
      Cytokine Signaling in Immune system, organism-specific biosystemCytokines are small proteins that regulate and mediate immunity, inflammation, and hematopoiesis. They are secreted in response to immune stimuli, and usually act briefly, locally, at very low concen...
    • DCC mediated attractive signaling, organism-specific biosystem (from REACTOME)
      DCC mediated attractive signaling, organism-specific biosystemThe DCC family includes DCC and neogenin in vertebrates. DCC is required for netrin-induced axon attraction. DCC is a transmembrane protein lacking any identifiable catalytic activity. Protein tyrosi...
    • Developmental Biology, organism-specific biosystem (from REACTOME)
      Developmental Biology, organism-specific biosystemAs a first step towards capturing the array of processes by which a fertilized egg gives rise to the diverse tissues of the body, examples of three kinds of processes have been annotated. These are a...
    • Disease, organism-specific biosystem (from REACTOME)
      Disease, organism-specific biosystemBiological processes are captured in Reactome by identifying the molecules (DNA, RNA, protein, small molecules) involved in them and describing the details of their interactions. From this molecular ...
    • E-cadherin signaling in keratinocytes, organism-specific biosystem (from Pathway Interaction Database)
      E-cadherin signaling in keratinocytes, organism-specific biosystem
      E-cadherin signaling in keratinocytes
    • EPHA forward signaling, organism-specific biosystem (from Pathway Interaction Database)
      EPHA forward signaling, organism-specific biosystem
      EPHA forward signaling
    • Ephrin A reverse signaling, organism-specific biosystem (from Pathway Interaction Database)
      Ephrin A reverse signaling, organism-specific biosystem
      Ephrin A reverse signaling
    • Ephrin B reverse signaling, organism-specific biosystem (from Pathway Interaction Database)
      Ephrin B reverse signaling, organism-specific biosystem
      Ephrin B reverse signaling
    • ErbB4 signaling events, organism-specific biosystem (from Pathway Interaction Database)
      ErbB4 signaling events, organism-specific biosystem
      ErbB4 signaling events
    • Fc epsilon RI signaling pathway, organism-specific biosystem (from KEGG)
      Fc epsilon RI signaling pathway, organism-specific biosystemFc epsilon RI-mediated signaling pathways in mast cells are initiated by the interaction of antigen (Ag) with IgE bound to the extracellular domain of the alpha chain of Fc epsilon RI. The activation...
    • Fc epsilon RI signaling pathway, conserved biosystem (from KEGG)
      Fc epsilon RI signaling pathway, conserved biosystemFc epsilon RI-mediated signaling pathways in mast cells are initiated by the interaction of antigen (Ag) with IgE bound to the extracellular domain of the alpha chain of Fc epsilon RI. The activation...
    • Fc-epsilon receptor I signaling in mast cells, organism-specific biosystem (from Pathway Interaction Database)
      Fc-epsilon receptor I signaling in mast cells, organism-specific biosystem
      Fc-epsilon receptor I signaling in mast cells
    • Focal Adhesion, organism-specific biosystem (from WikiPathways)
      Focal Adhesion, organism-specific biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • Focal adhesion, organism-specific biosystem (from KEGG)
      Focal adhesion, organism-specific biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • Focal adhesion, conserved biosystem (from KEGG)
      Focal adhesion, conserved biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • GPVI-mediated activation cascade, organism-specific biosystem (from REACTOME)
      GPVI-mediated activation cascade, organism-specific biosystemThe GPVI receptor is a complex of the GPVI protein with Fc epsilon R1 gamma (FcR). The Src family kinases Fyn and Lyn constitutively associate with the GPVI-FcR complex in platelets and initiate plat...
    • Glypican 1 network, organism-specific biosystem (from Pathway Interaction Database)
      Glypican 1 network, organism-specific biosystem
      Glypican 1 network
    • HIV Infection, organism-specific biosystem (from REACTOME)
      HIV Infection, organism-specific biosystemThe global pandemic of Human Immunodeficiency Virus (HIV) infection has resulted in tens of millions of people infected by the virus and millions more affected. UNAIDS estimates around 40 million ...
    • Hemostasis, organism-specific biosystem (from REACTOME)
      Hemostasis, organism-specific biosystemHemostasis is a physiological response that culminates in the arrest of bleeding from an injured vessel. Under normal conditions the vascular endothelium supports vasodilation, inhibits platelet adhe...
    • Host Interactions of HIV factors, organism-specific biosystem (from REACTOME)
      Host Interactions of HIV factors, organism-specific biosystemLike all viruses, HIV-1 must co-opt the host cell macromolecular transport and processing machinery. HIV-1 Vpr and Rev proteins play key roles in this co-optation. Efficient HIV-1 replication likewis...
    • IL-2 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-2 Signaling Pathway, organism-specific biosystemInterleukin-2 belongs to a family of cytokines, which includes IL-4, IL-7, IL-9, IL-15 and IL-21. IL-2 signals through a receptor complex consisting of IL-2 specific IL-2 receptor alpha (CD25), IL-2 ...
    • IL-3 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-3 Signaling Pathway, organism-specific biosystemInterleukin-3 belongs to a family of cytokines, which includes IL-5 and GM-CSF. It signals through a receptor complex comprising of an IL-3 specific IL-3 receptor alpha subunit (IL3RA) and a common b...
    • IL-4 signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-4 signaling Pathway, organism-specific biosystemInterleukin-4 belongs to the IL-2 family of cytokines, which includes IL-2, IL-7, IL-9, IL-15 and IL-21. It signals through 2 different receptor complexes; Receptor complex 1 comprises of IL-4 recept...
    • IL-6 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-6 Signaling Pathway, organism-specific biosystemInterleukin-6 belongs to a family of cytokines which includes IL-11, ciliary neurotrophic factor (CNTF), cardiotropin-1, cardiotrophin-like cytokine, leukemia inhibitory factor (LIF) and Oncostatin M...
    • IL-7 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-7 Signaling Pathway, organism-specific biosystemInterleukin-7 belongs to a family of cytokines, which includes IL-2, IL-4, IL-9, IL-15 and IL-21. It signals through a receptor complex consisting of IL-7 receptor alpha chain (IL7RA) and a common ga...
    • IL2-mediated signaling events, organism-specific biosystem (from Pathway Interaction Database)
      IL2-mediated signaling events, organism-specific biosystem
      IL2-mediated signaling events
    • Immune System, organism-specific biosystem (from REACTOME)
      Immune System, organism-specific biosystemHumans are exposed to millions of potential pathogens daily, through contact, ingestion, and inhalation. Our ability to avoid infection depends on the adaptive immune system and during the first crit...
    • Integrin-mediated cell adhesion, organism-specific biosystem (from WikiPathways)
      Integrin-mediated cell adhesion, organism-specific biosystemIntegrins are receptors that mediate attachment between a cell and the tissues surrounding it, which may be other cells or the extracellular matrix (ECM). They also play a role in cell signaling and ...
    • Interleukin-3, 5 and GM-CSF signaling, organism-specific biosystem (from REACTOME)
      Interleukin-3, 5 and GM-CSF signaling, organism-specific biosystemThe Interleukin-3 (IL-3), IL-5 and Granulocyte-macrophage colony stimulating factor (GM-CSF) receptors form a family of heterodimeric receptors that have specific alpha chains but share a common beta...
    • Kit Receptor Signaling Pathway, organism-specific biosystem (from WikiPathways)
      Kit Receptor Signaling Pathway, organism-specific biosystemKit is a receptor protein tyrosine kinase, which is a receptor for stem cell factor or kit ligand. Signaling through Kit is important for formation of red cells, lymphocytes, mast cells and platelets...
    • Measles, organism-specific biosystem (from KEGG)
      Measles, organism-specific biosystemMeasles virus (MV) is highly contagious virus that leads infant death worldwide. Humans are the unique natural reservoir for this virus. It causes severe immunosuppression favouring secondary bacteri...
    • Measles, conserved biosystem (from KEGG)
      Measles, conserved biosystemMeasles virus (MV) is highly contagious virus that leads infant death worldwide. Humans are the unique natural reservoir for this virus. It causes severe immunosuppression favouring secondary bacteri...
    • NCAM signaling for neurite out-growth, organism-specific biosystem (from REACTOME)
      NCAM signaling for neurite out-growth, organism-specific biosystemThe neural cell adhesion molecule, NCAM, is a member of the immunoglobulin (Ig) superfamily and is involved in a variety of cellular processes of importance for the formation and maintenance of the n...
    • Natural killer cell mediated cytotoxicity, organism-specific biosystem (from KEGG)
      Natural killer cell mediated cytotoxicity, organism-specific biosystemNatural killer (NK) cells are lymphocytes of the innate immune system that are involved in early defenses against both allogeneic (nonself) cells and autologous cells undergoing various forms of stre...
    • Natural killer cell mediated cytotoxicity, conserved biosystem (from KEGG)
      Natural killer cell mediated cytotoxicity, conserved biosystemNatural killer (NK) cells are lymphocytes of the innate immune system that are involved in early defenses against both allogeneic (nonself) cells and autologous cells undergoing various forms of stre...
    • Nef and signal transduction, organism-specific biosystem (from REACTOME)
      Nef and signal transduction, organism-specific biosystemNef interferes with cellular signal transduction pathways in a number of ways. Nef is associated with lipid rafts through its amino-terminal myristoylation and a proline-rich SH3-binding domain. Thes...
    • Nephrin interactions, organism-specific biosystem (from REACTOME)
      Nephrin interactions, organism-specific biosystemNephrin is a member of the Super-IgG-Molecule family and is most prominently expressed in kidney podocytes. It is a major if not the most important structural component of the slit diaphragm, a modif...
    • Nephrin/Neph1 signaling in the kidney podocyte, organism-specific biosystem (from Pathway Interaction Database)
      Nephrin/Neph1 signaling in the kidney podocyte, organism-specific biosystem
      Nephrin/Neph1 signaling in the kidney podocyte
    • Netrin mediated repulsion signals, organism-specific biosystem (from REACTOME)
      Netrin mediated repulsion signals, organism-specific biosystemUnc5 netrin receptors mediate repellent responses to netrin. Four Unc5 members have been found in humans: Unc5A, B, C and D. Different studies have suggested that long-range repulsion to netrin requi...
    • Netrin-1 signaling, organism-specific biosystem (from REACTOME)
      Netrin-1 signaling, organism-specific biosystemNetrins are secreted proteins that play a crucial role in neuronal migration and in axon guidance during the development of the nervous system. To date, several Netrins have been described in mouse a...
    • Osteoclast differentiation, organism-specific biosystem (from KEGG)
      Osteoclast differentiation, organism-specific biosystemThe osteoclasts, multinucleared cells originating from the hematopoietic monocyte-macrophage lineage, are responsible for bone resorption. Osteoclastogenesis is mainly regulated by signaling pathways...
    • Osteoclast differentiation, conserved biosystem (from KEGG)
      Osteoclast differentiation, conserved biosystemThe osteoclasts, multinucleared cells originating from the hematopoietic monocyte-macrophage lineage, are responsible for bone resorption. Osteoclastogenesis is mainly regulated by signaling pathways...
    • PDGFR-beta signaling pathway, organism-specific biosystem (from Pathway Interaction Database)
      PDGFR-beta signaling pathway, organism-specific biosystem
      PDGFR-beta signaling pathway
    • PECAM1 interactions, organism-specific biosystem (from REACTOME)
      PECAM1 interactions, organism-specific biosystemPECAM-1/CD31 is a member of the immunoglobulin superfamily (IgSF) and has been implicated to mediate the adhesion and trans-endothelial migration of T-lymphocytes into the vascular wall, T cell activ...
    • Pathogenic Escherichia coli infection, organism-specific biosystem (from KEGG)
      Pathogenic Escherichia coli infection, organism-specific biosystemEnteropathogenic E. coli (EPEC) and enterohemorrhagic E. coli (EHEC) are closely related pathogenic strains of Escherichia coli. The hallmark of EPEC/EHEC infections [DS:H00278 H00277] is induction o...
    • Pathogenic Escherichia coli infection, conserved biosystem (from KEGG)
      Pathogenic Escherichia coli infection, conserved biosystemEnteropathogenic E. coli (EPEC) and enterohemorrhagic E. coli (EHEC) are closely related pathogenic strains of Escherichia coli. The hallmark of EPEC/EHEC infections [DS:H00278 H00277] is induction o...
    • Platelet Adhesion to exposed collagen, organism-specific biosystem (from REACTOME)
      Platelet Adhesion to exposed collagen, organism-specific biosystemInitiation of platelet adhesion is the first step in the formation of the platelet plug. Circulating platelets are arrested and subsequently activated by exposed collagen and vWF. Several collagen bi...
    • Platelet activation, signaling and aggregation, organism-specific biosystem (from REACTOME)
      Platelet activation, signaling and aggregation, organism-specific biosystemPlatelet activation begins with the initial binding of adhesive ligands and of the excitatory platelet agonists (released or generated at the sites of vascular trauma) to cognate receptors on the pla...
    • Prion diseases, organism-specific biosystem (from KEGG)
      Prion diseases, organism-specific biosystemPrion diseases, also termed transmissible spongiform encephalopathies (TSEs), are a group of fatal neurodegenerative diseases that affect humans and a number of other animal species. The etiology of ...
    • Prion diseases, conserved biosystem (from KEGG)
      Prion diseases, conserved biosystemPrion diseases, also termed transmissible spongiform encephalopathies (TSEs), are a group of fatal neurodegenerative diseases that affect humans and a number of other animal species. The etiology of ...
    • Reelin signaling pathway, organism-specific biosystem (from Pathway Interaction Database)
      Reelin signaling pathway, organism-specific biosystem
      Reelin signaling pathway
    • Regulation of KIT signaling, organism-specific biosystem (from REACTOME)
      Regulation of KIT signaling, organism-specific biosystemSCF induced proliferation is negatively regulated by various proteins including SHP1, PKC, CBL, SOCS1, SOCS6 and LNK.
    • Regulation of p38-alpha and p38-beta, organism-specific biosystem (from Pathway Interaction Database)
      Regulation of p38-alpha and p38-beta, organism-specific biosystem
      Regulation of p38-alpha and p38-beta
    • Regulation of signaling by CBL, organism-specific biosystem (from REACTOME)
      Regulation of signaling by CBL, organism-specific biosystemCbl is an E3 ubiquitin-protein ligase that negatively regulates signaling pathways by targeting proteins for ubiquitination and proteasomal degradation (Rao et al. 2002). Cbl negatively regulates PI3...
    • SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion, organism-specific biosystem (from REACTOME)
      SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion, organism-specific biosystemSema3A, a prototypical semaphorin, acts as a chemorepellent or a chemoattractant for axons by activating a receptor complex comprising neuropilin-1 as the ligand-binding subunit and plexin-A1 as the ...
    • Sema3A PAK dependent Axon repulsion, organism-specific biosystem (from REACTOME)
      Sema3A PAK dependent Axon repulsion, organism-specific biosystemActivated Rac1 bound to plexin-A might modulate actin dynamics through the sequential phosphorylation and activation of PAK, LIMK1 and cofilin.
    • Semaphorin interactions, organism-specific biosystem (from REACTOME)
      Semaphorin interactions, organism-specific biosystemSemaphorins are a large family of cell surface and secreted guidance molecules divided into eight classes on the basis of their structures. They all have an N-terminal conserved sema domain. Semaphor...
    • Signal Transduction, organism-specific biosystem (from REACTOME)
      Signal Transduction, organism-specific biosystemSignal transduction is a process in which extracellular signals elicit changes in cell state and activity. Transmembrane receptors sense changes in the cellular environment by binding ligands, such a...
    • Signaling by ERBB2, organism-specific biosystem (from REACTOME)
      Signaling by ERBB2, organism-specific biosystemERBB2, also known as HER2 or NEU, is a receptor tyrosine kinase (RTK) belonging to the EGFR family. ERBB2 possesses an extracellular domain that does not bind any known ligand, contrary to other EGFR...
    • Signaling by Interleukins, organism-specific biosystem (from REACTOME)
      Signaling by Interleukins, organism-specific biosystemInterleukins are low molecular weight proteins that bind to cell surface receptors and act in an autocrine and/or paracrine fashion. They were first identified as factors produced by leukocytes but a...
    • Signaling by SCF-KIT, organism-specific biosystem (from REACTOME)
      Signaling by SCF-KIT, organism-specific biosystemStem cell factor (SCF) is a growth factor with membrane bound and soluble forms. It is expressed by fibroblasts and endothelial cells throughout the body, promoting proliferation, migration, survival...
    • Signaling by the B Cell Receptor (BCR), organism-specific biosystem (from REACTOME)
      Signaling by the B Cell Receptor (BCR), organism-specific biosystemMature B cells express IgM and IgD immunoglobulins which are complexed at the plasma membrane with Ig-alpha (CD79A, MB-1) and Ig-beta (CD79B, B29) to form the B cell receptor (BCR) (Fu et al. 1974, F...
    • Signaling events mediated by PTP1B, organism-specific biosystem (from Pathway Interaction Database)
      Signaling events mediated by PTP1B, organism-specific biosystem
      Signaling events mediated by PTP1B
    • Signaling events mediated by VEGFR1 and VEGFR2, organism-specific biosystem (from Pathway Interaction Database)
      Signaling events mediated by VEGFR1 and VEGFR2, organism-specific biosystem
      Signaling events mediated by VEGFR1 and VEGFR2
    • Signaling events mediated by focal adhesion kinase, organism-specific biosystem (from Pathway Interaction Database)
      Signaling events mediated by focal adhesion kinase, organism-specific biosystem
      Signaling events mediated by focal adhesion kinase
    • Syndecan-3-mediated signaling events, organism-specific biosystem (from Pathway Interaction Database)
      Syndecan-3-mediated signaling events, organism-specific biosystem
      Syndecan-3-mediated signaling events
    • T Cell Receptor Signaling Pathway, organism-specific biosystem (from WikiPathways)
      T Cell Receptor Signaling Pathway, organism-specific biosystem
      T Cell Receptor Signaling Pathway
    • T cell receptor signaling pathway, organism-specific biosystem (from KEGG)
      T cell receptor signaling pathway, organism-specific biosystemActivation of T lymphocytes is a key event for an efficient response of the immune system. It requires the involvement of the T-cell receptor (TCR) as well as costimulatory molecules such as CD28. En...
    • T cell receptor signaling pathway, conserved biosystem (from KEGG)
      T cell receptor signaling pathway, conserved biosystemActivation of T lymphocytes is a key event for an efficient response of the immune system. It requires the involvement of the T-cell receptor (TCR) as well as costimulatory molecules such as CD28. En...
    • TCR signaling in naive CD4+ T cells, organism-specific biosystem (from Pathway Interaction Database)
      TCR signaling in naive CD4+ T cells, organism-specific biosystem
      TCR signaling in naive CD4+ T cells
    • TCR signaling in naive CD8+ T cells, organism-specific biosystem (from Pathway Interaction Database)
      TCR signaling in naive CD8+ T cells, organism-specific biosystem
      TCR signaling in naive CD8+ T cells
    • The role of Nef in HIV-1 replication and disease pathogenesis, organism-specific biosystem (from REACTOME)
      The role of Nef in HIV-1 replication and disease pathogenesis, organism-specific biosystemThe HIV-1 Nef protein is a 27-kDa myristoylated protein that is abundantly produced during the early phase of viral replication cycle. It is highly conserved in all primate lentiviruses, suggesting t...
    • Thromboxane A2 receptor signaling, organism-specific biosystem (from Pathway Interaction Database)
      Thromboxane A2 receptor signaling, organism-specific biosystem
      Thromboxane A2 receptor signaling
    • Viral myocarditis, organism-specific biosystem (from KEGG)
      Viral myocarditis, organism-specific biosystemMyocarditis is a cardiac disease associated with inflammation and injury of the myocardium. It results from various etiologies, both noninfectious and infectious, but coxsackievirus B3 (CVB3) is stil...
    • amb2 Integrin signaling, organism-specific biosystem (from Pathway Interaction Database)
      amb2 Integrin signaling, organism-specific biosystem
      amb2 Integrin signaling

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ephrin receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    glycoprotein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    non-membrane spanning protein tyrosine kinase activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein tyrosine kinase activity TAS
    Traceable Author Statement
    more info
     
    Process Evidence Code Pubs
    T cell costimulation TAS
    Traceable Author Statement
    more info
     
    T cell receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    axon guidance TAS
    Traceable Author Statement
    more info
     
    blood coagulation TAS
    Traceable Author Statement
    more info
     
    calcium ion transport NAS
    Non-traceable Author Statement
    more info
    PubMed 
    feeding behavior TAS
    Traceable Author Statement
    more info
    PubMed 
    interspecies interaction between organisms IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular protein kinase cascade TAS
    Traceable Author Statement
    more info
    PubMed 
    learning TAS
    Traceable Author Statement
    more info
    PubMed 
    leukocyte migration TAS
    Traceable Author Statement
    more info
     
    multicellular organismal development IEA
    Inferred from Electronic Annotation
    more info
     
    platelet activation TAS
    Traceable Author Statement
    more info
     
    protein phosphorylation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    regulation of defense response to virus by virus TAS
    Traceable Author Statement
    more info
     
    viral reproduction TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    cytosol TAS
    Traceable Author Statement
    more info
     
    endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    tyrosine-protein kinase Fyn
    Names
    tyrosine-protein kinase Fyn
    src-like kinase
    proto-oncogene Syn
    c-syn protooncogene
    proto-oncogene c-Fyn
    src/yes-related novel
    tyrosine kinase p59fyn(T)
    OKT3-induced calcium influx regulator
    NP_001229708.1
    NP_002028.1
    NP_694592.1
    NP_694593.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_002037.5NP_002028.1  tyrosine-protein kinase Fyn isoform a

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
      Source sequence(s)
      BP391373, DA570412, M14333, Z97989
      Consensus CDS
      CCDS5094.1
      UniProtKB/Swiss-Prot
      P06241
      Related
      ENSP00000346671, OTTHUMP00000017914, ENST00000354650, OTTHUMT00000043655
      Conserved Domains (4) summary
      cd00174
      Location:87140
      Blast Score: 179
      SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of ...
      cd05034
      Location:264523
      Blast Score: 1489
      PTKc_Src_like; Catalytic domain of Src kinase-like Protein Tyrosine Kinases
      cd10418
      Location:145245
      Blast Score: 563
      SH2_Src_Fyn_isoform_a_like; Src homology 2 (SH2) domain found in Fyn isoform a like proteins
      pfam07714
      Location:271520
      Blast Score: 1044
      Pkinase_Tyr; Protein tyrosine kinase
    2. NM_153047.3NP_694592.1  tyrosine-protein kinase Fyn isoform b

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, and lacks an alternate in-frame exon but includes a different in-frame exon in the central coding region, compared to variant 1. The encoded isoform (b) is shorter than isoform a.
      Source sequence(s)
      BC032496, BP391373, S74774, Z97989
      Consensus CDS
      CCDS5095.1
      UniProtKB/TrEMBL
      H0UI48
      UniProtKB/Swiss-Prot
      P06241
      Related
      ENSP00000440646, ENST00000538466
      Conserved Domains (4) summary
      cd00174
      Location:87140
      Blast Score: 180
      SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of ...
      cd05034
      Location:261520
      Blast Score: 1459
      PTKc_Src_like; Catalytic domain of Src kinase-like Protein Tyrosine Kinases
      cd09933
      Location:145244
      Blast Score: 554
      SH2_Src_family; Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases
      pfam07714
      Location:268517
      Blast Score: 1043
      Pkinase_Tyr; Protein tyrosine kinase
    3. NM_153048.3NP_694593.1  tyrosine-protein kinase Fyn isoform c

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, and lacks an alternate in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (c) that is shorter than isoform a.
      Source sequence(s)
      BC032496, BP391373, DA815564, Z97989
      Consensus CDS
      CCDS5096.1
      UniProtKB/Swiss-Prot
      P06241
      Related
      ENSP00000229471, OTTHUMP00000226453, ENST00000229471, OTTHUMT00000378266
      Conserved Domains (4) summary
      cd00174
      Location:87140
      Blast Score: 179
      SH3; Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of ...
      cd05034
      Location:233468
      Blast Score: 1348
      PTKc_Src_like; Catalytic domain of Src kinase-like Protein Tyrosine Kinases
      cd10368
      Location:145245
      Blast Score: 537
      SH2_Src_Fyn; Src homology 2 (SH2) domain found in Fyn
      pfam07714
      Location:231465
      Blast Score: 983
      Pkinase_Tyr; Protein tyrosine kinase

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000006.11 Reference GRCh37.p5 Primary Assembly

      Range
      111982479..112194655, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000138.1 Alternate HuRef

      Range
      109555067..109767060, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001242779.1: Suppressed sequence

      Description
      NM_001242779.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AL109916.17 (2000..49182) None
    genomic AL158035.14 (2000..89492) None
    genomic CH471051.2 EAW48278.1
      EAW48279.1
      EAW48280.1
      EAW48281.1
      EAW48282.1
      EAW48283.1
      EAW48284.1
    genomic Z97989.1 CAI22299.1
      CAI22300.1
      CAI22301.1
    mRNA AB451293.1 BAG70107.1
    mRNA AB451426.1 BAG70240.1
    mRNA AI187118.1 None
    mRNA AK056699.1 BAG51788.1
    mRNA AY429536.1 None
    mRNA BC032496.1 AAH32496.1
    mRNA BI552534.1 None
    mRNA BP391373.1 None
    mRNA CX781584.1 None
    mRNA CX872011.1 None
    mRNA DA570412.1 None
    mRNA DA815564.1 None
    mRNA DA922886.1 None
    mRNA DA931034.1 None
    mRNA M14333.1 AAC08285.1
    mRNA M14676.1 AAA36615.1
    mRNA S74774.1 AAB33113.2
    other-genetic JF432194.1 ADZ15411.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    P06241.3 GenPept UniProtKB/Swiss-Prot:P06241
    Q5R3A8 GenPept UniProtKB/TrEMBL:Q5R3A8

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