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Bsx brain specific homeobox [ Mus musculus (house mouse) ]

Gene ID: 244813, updated on 8-May-2016
Official Symbol
Bsxprovided by MGI
Official Full Name
brain specific homeoboxprovided by MGI
Primary source
MGI:MGI:2669849
See related
Ensembl:ENSMUSG00000054360 Vega:OTTMUSG00000027431
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Bsx1a; Bsx1b
Orthologs
Location:
9; 9 A5.1
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 9 NC_000075.6 (40871854..40878962)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (40682210..40686055)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, C/D box 14D Neighboring gene small nucleolar RNA, C/D box 14E Neighboring gene heat shock protein 8 Neighboring gene juvenile hydrocephalus Neighboring gene ubiquitin specific peptidase 10 pseudogene Neighboring gene cytotoxic and regulatory T cell molecule

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC129478, MGC129479

Gene Ontology Provided by MGI

Process Evidence Code Pubs
eating behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
locomotory behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
mammary gland involution IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of transcription from RNA polymerase II promoter IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription from RNA polymerase II promoter IGI
Inferred from Genetic Interaction
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
transcription factor complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
brain-specific homeobox protein homolog
Names
bsx

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178245.3NP_839976.1  brain-specific homeobox protein homolog

    See identical proteins and their annotated locations for NP_839976.1

    Status: PROVISIONAL

    Source sequence(s)
    AC158355
    Consensus CDS
    CCDS23084.1
    UniProtKB/Swiss-Prot
    Q810B3
    Related
    ENSMUSP00000068057, OTTMUSP00000034220, ENSMUST00000067375, OTTMUST00000067876
    Conserved Domains (1) summary
    cd00086
    Location:111168
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p3 C57BL/6J

    Range
    40871854..40878962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006510309.1XP_006510372.1  

    See identical proteins and their annotated locations for XP_006510372.1

    Conserved Domains (1) summary
    cd00086
    Location:2380
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  2. XM_006510306.1XP_006510369.1  

    Conserved Domains (1) summary
    cd00086
    Location:3289
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  3. XM_006510308.2XP_006510371.1  

    See identical proteins and their annotated locations for XP_006510371.1

    Conserved Domains (1) summary
    cd00086
    Location:2380
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.

Alternate Mm_Celera

Genomic

  1. AC_000031.1 Alternate Mm_Celera

    Range
    38108339..38112231
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)