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Zdhhc13 zinc finger, DHHC domain containing 13 [ Mus musculus (house mouse) ]

Gene ID: 243983, updated on 21-May-2016
Official Symbol
Zdhhc13provided by MGI
Official Full Name
zinc finger, DHHC domain containing 13provided by MGI
Primary source
MGI:MGI:1919227
See related
Ensembl:ENSMUSG00000030471 Vega:OTTMUSG00000030356
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
skc4; kojak; HIP3RP; Hip14l; C530010M18; 2410004E01Rik
Orthologs
Location:
7; 7 B4
Exon count:
17
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 7 NC_000073.6 (48789003..48827440)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (56044373..56082807)

Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 42384 Neighboring gene predicted gene, 32263 Neighboring gene cysteine and glycine-rich protein 3 Neighboring gene uncharacterized LOC545966 Neighboring gene E2F transcription factor 8

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Chemically induced (ENU) (1)  1 citation
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
magnesium ion transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
palmitoyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
signal transducer activity ISO
Inferred from Sequence Orthology
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
positive regulation of I-kappaB kinase/NF-kappaB signaling ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
Golgi-associated vesicle membrane IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
palmitoyltransferase ZDHHC13
Names
DHHC-13
HIP14-related protein
huntingtin-interacting protein 14-related protein
probable palmitoyltransferase ZDHHC13
zinc finger DHHC domain-containing protein 13
NP_082307.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028031.3NP_082307.1  palmitoyltransferase ZDHHC13

    See identical proteins and their annotated locations for NP_082307.1

    Status: PROVISIONAL

    Source sequence(s)
    AC124977
    Consensus CDS
    CCDS52259.1
    UniProtKB/Swiss-Prot
    Q9CWU2
    Related
    ENSMUSP00000112498, OTTMUSP00000039367, ENSMUST00000118927, OTTMUST00000075207
    Conserved Domains (4) summary
    cd00204
    Location:79192
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01529
    Location:388556
    zf-DHHC; DHHC palmitoyltransferase
    pfam12796
    Location:86179
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:202257
    Ank_5; Ankyrin repeats (many copies)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000073.6 Reference GRCm38.p3 C57BL/6J

    Range
    48789003..48827440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540896.2XP_006540959.1  

    See identical proteins and their annotated locations for XP_006540959.1

    Related
    ENSMUSP00000123603, OTTMUSP00000039368, ENSMUST00000125280, OTTMUST00000075208
    Conserved Domains (3) summary
    cd00204
    Location:15139
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01529
    Location:258426
    zf-DHHC; DHHC palmitoyltransferase
    pfam13857
    Location:72127
    Ank_5; Ankyrin repeats (many copies)
  2. XM_006540898.2XP_006540961.1  

    See identical proteins and their annotated locations for XP_006540961.1

    Conserved Domains (3) summary
    cd00204
    Location:15139
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01529
    Location:258426
    zf-DHHC; DHHC palmitoyltransferase
    pfam13857
    Location:72127
    Ank_5; Ankyrin repeats (many copies)

Alternate Mm_Celera

Genomic

  1. AC_000029.1 Alternate Mm_Celera

    Range
    44233034..44271497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)