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TMEM245 transmembrane protein 245 [ Homo sapiens (human) ]

Gene ID: 23731, updated on 3-Apr-2016
Official Symbol
TMEM245provided by HGNC
Official Full Name
transmembrane protein 245provided by HGNC
Primary source
HGNC:HGNC:1363
See related
Ensembl:ENSG00000106771 HPRD:09866; Vega:OTTHUMG00000020469
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CG2; CG-2; C9orf5
Orthologs
Location:
9q31
Exon count:
18
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 9 NC_000009.12 (109015135..109119945, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (111777415..111882225, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 206 member A Neighboring gene catenin alpha like 1 Neighboring gene uncharacterized LOC105376216 Neighboring gene RNA, 5.8S ribosomal pseudogene 3 Neighboring gene uncharacterized LOC105376215 Neighboring gene microRNA 32 Neighboring gene ferric chelate reductase 1 like Neighboring gene erythrocyte membrane protein band 4.1 like 4B Neighboring gene mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 11

NHGRI GWAS Catalog

Description
BCL9 and C9orf5 are associated with negative symptoms in schizophrenia: meta-analysis of two genome-wide association studies.
NHGRI GWA Catalog
Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
NHGRI GWA Catalog
Whole genome association scan for genetic polymorphisms influencing information processing speed.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ23668, FLJ33224

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
integral component of membrane NAS
Non-traceable Author Statement
more info
PubMed 
Preferred Names
transmembrane protein 245
Names
protein CG-2
transmembrane protein C9orf5

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032012.3NP_114401.2  transmembrane protein 245

    See identical proteins and their annotated locations for NP_114401.2

    Status: VALIDATED

    Source sequence(s)
    AL354797, AL556162, BC014248, BE675782, BM817899, BP351493, BP360669, DC341553
    Consensus CDS
    CCDS43858.1
    UniProtKB/Swiss-Prot
    Q9H330
    Related
    ENSP00000363714, OTTHUMP00000021880, ENST00000374586, OTTHUMT00000053587
    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:594840
    UPF0118; Domain of unknown function DUF20

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p2 Primary Assembly

    Range
    109015135..109119945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011518450.1XP_011516752.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:554800
    UPF0118; Domain of unknown function DUF20
  2. XM_011518449.1XP_011516751.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:555801
    UPF0118; Domain of unknown function DUF20
  3. XM_011518452.1XP_011516754.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:516762
    UPF0118; Domain of unknown function DUF20
  4. XM_011518446.1XP_011516748.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:593839
    UPF0118; Domain of unknown function DUF20
  5. XM_011518451.1XP_011516753.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:551797
    UPF0118; Domain of unknown function DUF20
  6. XM_011518447.1XP_011516749.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:586832
    UPF0118; Domain of unknown function DUF20
  7. XM_011518448.1XP_011516750.1  

    Conserved Domains (2) summary
    pfam06679
    Location:680
    DUF1180; Protein of unknown function (DUF1180)
    cl00465
    Location:559805
    UPF0118; Domain of unknown function DUF20

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 Alternate CHM1_1.1

    Range
    111923910..112028701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001099734.1: Suppressed sequence

    Description
    NM_001099734.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.