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ZMYND8 zinc finger, MYND-type containing 8 [ Homo sapiens (human) ]

Gene ID: 23613, updated on 13-Jul-2014
Official Symbol
ZMYND8provided by HGNC
Official Full Name
zinc finger, MYND-type containing 8provided by HGNC
Primary source
HGNC:9397
Locus tag
RP5-890O15.1
See related
Ensembl:ENSG00000101040; HPRD:10166; MIM:615713; Vega:OTTHUMG00000032667
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RACK7; PRKCBP1; PRO2893
Summary
The protein encoded by this gene is a receptor for activated C-kinase (RACK) protein. The encoded protein has been shown to bind in vitro to activated protein kinase C beta I. In addition, this protein is a cutaneous T-cell lymphoma-associated antigen. Finally, the protein contains a bromodomain and two zinc fingers, and is thought to be a transcriptional regulator. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
See ZMYND8 in Epigenomics, MapViewer
Location:
20q13.12
Exon count :
32
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 20 NC_000020.11 (47209214..47356889, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (45837994..45985485, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene EYA transcriptional coactivator and phosphatase 2 Neighboring gene ribosomal protein S2 pseudogene 54 Neighboring gene microRNA 3616 Neighboring gene uncharacterized LOC100131496 Neighboring gene uncharacterized LOC101927377 Neighboring gene uncharacterized LOC102723442 Neighboring gene ribosomal protein L35a pseudogene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Protein interactions

Protein Gene Interaction Pubs
Envelope surface glycoprotein gp120 env Genes, including GABRP, ADF, HINT, PRSS2, SDCBP, PTK9, PPP2R5B, ITGA3, PRKCBP1, HMOX2, HAT1, PPP1cB, and ICAM-1, are upregulated after treatment of human astrocytes with HIV-1 gp120 PubMed

Go to the HIV-1, Human Protein Interaction Database

  • Integrated Breast Cancer Pathway, organism-specific biosystem (from WikiPathways)
    Integrated Breast Cancer Pathway, organism-specific biosystemThis pathway incorporates the most important proteins for Breast Cancer. The Rp score from the Connectivity-Maps (C-Maps) webserver was used to determine the rank of the most important proteins in Br...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA polymerase II transcription corepressor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
repressing transcription factor binding ISS
Inferred from Sequence or Structural Similarity
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
negative regulation of transcription from RNA polymerase II promoter ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
protein kinase C-binding protein 1
Names
protein kinase C-binding protein 1
CTCL tumor antigen se14-3
predicted protein of HQ2893
zinc finger MYND domain-containing protein 8
cutaneous T-cell lymphoma-associated antigen se14-3

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281769.1NP_001268698.1  protein kinase C-binding protein 1 isoform d

    See proteins identical to NP_001268698.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) lacks several exons and its 3'-terminal exon extends past a splice site that is used in variant 1. The encoded isoform (d) has a shorter and distinct C-terminus, compared to isoform a.
    Source sequence(s)
    BC092432, BX095755, DC362133
    UniProtKB/TrEMBL
    Q569J9
    Conserved Domains (1) summary
    pfam00628
    Location:110153
    Blast Score: 116
    PHD; PHD-finger
  2. NM_001281771.2NP_001268700.1  protein kinase C-binding protein 1 isoform e

    See proteins identical to NP_001268700.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (e) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC136608, BC146802, DC362133, DQ368671, DR422399
    Consensus CDS
    CCDS63304.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 389
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 497
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:824893
    Blast Score: 94
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:85125
    Blast Score: 139
    PHD; PHD-finger
    pfam01753
    Location:896930
    Blast Score: 127
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
  3. NM_001281772.2NP_001268701.1  protein kinase C-binding protein 1 isoform f

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR, has multiple coding region differences, and initiates translation from an alternate start codon, compared to variant 1. The encoded isoform (f) is shorter and has a distinct N-terminus, compared to isoform a.
    Source sequence(s)
    AB032951, AI275390, AK294511, AL022342, BC146802, DC362133, DQ368674, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:9561025
    Blast Score: 95
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:90130
    Blast Score: 142
    PHD; PHD-finger
    pfam01753
    Location:10281062
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 775
    DUF3544; Domain of unknown function (DUF3544)
  4. NM_001281773.2NP_001268702.1  protein kinase C-binding protein 1 isoform g

    See proteins identical to NP_001268702.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in its 5' UTR, uses an alternate in-frame splice site in the central coding region, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (g) is longer, compared to isoform a.
    Source sequence(s)
    AI275390, AK299899, AL022342, BC146802, DC362133, DR422399
    Consensus CDS
    CCDS63300.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 385
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:90130
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10281062
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9581026
    Blast Score: 85
    Syntaxin; Syntaxin
  5. NM_001281774.2NP_001268703.1  protein kinase C-binding protein 1 isoform h

    See proteins identical to NP_001268703.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in its 5' UTR, and initiates translation from a downstream start codon, compared to variant 1. The encoded isoform (h) has a shorter N-terminus, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, BX641005, DC362133, DQ368669, DR422399
    Consensus CDS
    CCDS63301.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:90130
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:9821016
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:912980
    Blast Score: 85
    Syntaxin; Syntaxin
  6. NM_001281775.2NP_001268704.1  protein kinase C-binding protein 1 isoform i

    See proteins identical to NP_001268704.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (9) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (i) is longer, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368673, DR422399
    Consensus CDS
    CCDS63306.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:289369
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:171269
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:110150
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10481082
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:432642
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9781046
    Blast Score: 84
    Syntaxin; Syntaxin
  7. NM_001281776.2NP_001268705.1  protein kinase C-binding protein 1 isoform j

    See proteins identical to NP_001268705.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (j) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AK299899, AL022342, BC146802, DC362133, DQ082999, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:289369
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:171269
    Blast Score: 497
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:849918
    Blast Score: 95
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:110150
    Blast Score: 139
    PHD; PHD-finger
    pfam01753
    Location:921955
    Blast Score: 127
    zf-MYND; MYND finger
    pfam12064
    Location:432642
    Blast Score: 781
    DUF3544; Domain of unknown function (DUF3544)
  8. NM_001281777.2NP_001268706.1  protein kinase C-binding protein 1 isoform k

    See proteins identical to NP_001268706.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (k) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368672, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:85125
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:9771011
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 775
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:907975
    Blast Score: 84
    Syntaxin; Syntaxin
  9. NM_001281778.2NP_001268707.1  protein kinase C-binding protein 1 isoform l

    See proteins identical to NP_001268707.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (12) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (l) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368674, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:9511020
    Blast Score: 95
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:85125
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10231057
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 774
    DUF3544; Domain of unknown function (DUF3544)
  10. NM_001281779.2NP_001268708.1  protein kinase C-binding protein 1 isoform m

    Status: REVIEWED

    Description
    Transcript Variant: This variant (13) differs in its 5' UTR and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (m) has a shorter N-terminus, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368675, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/TrEMBL
    Q2HXV5
    Conserved Domains (3) summary
    cd05841
    Location:21101
    Blast Score: 391
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    pfam01753
    Location:734768
    Blast Score: 136
    zf-MYND; MYND finger
    pfam12064
    Location:164374
    Blast Score: 744
    DUF3544; Domain of unknown function (DUF3544)
  11. NM_001281780.2NP_001268709.1  protein kinase C-binding protein 1 isoform n

    Status: REVIEWED

    Description
    Transcript Variant: This variant (14) differs in its 5' UTR, lacks an in-frame exon in the 3' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (n) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368676, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/TrEMBL
    Q2HXV5
    Conserved Domains (3) summary
    cd05841
    Location:21101
    Blast Score: 392
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    pfam01753
    Location:734768
    Blast Score: 138
    zf-MYND; MYND finger
    pfam12064
    Location:164374
    Blast Score: 742
    DUF3544; Domain of unknown function (DUF3544)
  12. NM_001281781.2NP_001268710.1  protein kinase C-binding protein 1 isoform o

    See proteins identical to NP_001268710.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (15) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (o) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368677, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (5) summary
    cd05841
    Location:264344
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 499
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:85125
    Blast Score: 139
    PHD; PHD-finger
    pfam01753
    Location:930964
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:407570
    Blast Score: 599
    DUF3544; Domain of unknown function (DUF3544)
  13. NM_001281782.2NP_001268711.1  protein kinase C-binding protein 1 isoform p

    See proteins identical to NP_001268711.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (16) uses an alternate in-frame splice site and lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (p) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368678, DR422399
    Consensus CDS
    CCDS63305.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 385
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:863947
    Blast Score: 97
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:85125
    Blast Score: 139
    PHD; PHD-finger
    pfam01753
    Location:950984
    Blast Score: 127
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 774
    DUF3544; Domain of unknown function (DUF3544)
  14. NM_001281783.2NP_001268712.1  protein kinase C-binding protein 1 isoform q

    See proteins identical to NP_001268712.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (17) uses an alternate in-frame splice site in the central coding region and lacks an in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (q) is longer, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368679, DR422399
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:289369
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:171269
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:110150
    Blast Score: 142
    PHD; PHD-finger
    pfam01753
    Location:10481082
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:432642
    Blast Score: 777
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9781046
    Blast Score: 84
    Syntaxin; Syntaxin
  15. NM_001281784.2NP_001268713.1  protein kinase C-binding protein 1 isoform r

    See proteins identical to NP_001268713.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (18) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (r) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368680, DR422399
    Consensus CDS
    CCDS63303.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 498
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:904973
    Blast Score: 94
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:85125
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:9761010
    Blast Score: 127
    zf-MYND; MYND finger
    pfam12064
    Location:407570
    Blast Score: 599
    DUF3544; Domain of unknown function (DUF3544)
  16. NM_012408.5NP_036540.3  protein kinase C-binding protein 1 isoform b

    See proteins identical to NP_036540.3

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) lacks an in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (b) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368670, DR422399
    Consensus CDS
    CCDS13404.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Related
    ENSP00000335537, OTTHUMP00000214762, ENST00000352431, OTTHUMT00000354482
    Conserved Domains (6) summary
    cd05841
    Location:289369
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:171269
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:110150
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10021036
    Blast Score: 130
    zf-MYND; MYND finger
    pfam12064
    Location:432642
    Blast Score: 777
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9321000
    Blast Score: 84
    Syntaxin; Syntaxin
  17. NM_183047.3NP_898868.1  protein kinase C-binding protein 1 isoform a

    See proteins identical to NP_898868.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368669, DR422399
    Consensus CDS
    CCDS13405.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Related
    ENSP00000420095, OTTHUMP00000214761, ENST00000471951, OTTHUMT00000354481
    Conserved Domains (6) summary
    cd05841
    Location:289369
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:171269
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:110150
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10021036
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:432642
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9321000
    Blast Score: 85
    Syntaxin; Syntaxin
  18. NM_183048.3NP_898869.1  protein kinase C-binding protein 1 isoform c

    See proteins identical to NP_898869.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks an in-frame exon in the 3' coding region and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a.
    Source sequence(s)
    AI275390, AL022342, BC146802, DC362133, DQ368671, DR422399
    Consensus CDS
    CCDS46613.1
    UniProtKB/TrEMBL
    A6H8Y8
    UniProtKB/Swiss-Prot
    Q9ULU4
    Related
    ENSP00000354166, OTTHUMP00000043381, ENST00000360911, OTTHUMT00000079590
    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:85125
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:9771011
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 774
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:907975
    Blast Score: 83
    Syntaxin; Syntaxin

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000020.11 

    Range
    47209214..47356889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005260362.2XP_005260419.1  

    Conserved Domains (6) summary
    cd05841
    Location:264344
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:146244
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:85125
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10231057
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:407617
    Blast Score: 775
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9531021
    Blast Score: 84
    Syntaxin; Syntaxin
  2. XM_005260369.2XP_005260426.1  

    Conserved Domains (6) summary
    cd05841
    Location:296376
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:178276
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:117157
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:10091043
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:439649
    Blast Score: 780
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9391007
    Blast Score: 84
    Syntaxin; Syntaxin
  3. XM_006723765.1XP_006723828.1  

    Conserved Domains (6) summary
    cd05841
    Location:296376
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:178276
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:117157
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:10091043
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:439649
    Blast Score: 780
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9391007
    Blast Score: 85
    Syntaxin; Syntaxin
  4. XM_005260361.2XP_005260418.1  

    Conserved Domains (6) summary
    cd05841
    Location:296376
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:178276
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:117157
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10551089
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:439649
    Blast Score: 780
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9851053
    Blast Score: 84
    Syntaxin; Syntaxin
  5. XM_005260356.2XP_005260413.1  

    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:296376
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:178276
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:117157
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10551089
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:439649
    Blast Score: 781
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9851053
    Blast Score: 84
    Syntaxin; Syntaxin
  6. XM_006723761.1XP_006723824.1  

    Conserved Domains (6) summary
    cd05841
    Location:271351
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:153251
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:92132
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:10301064
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:414624
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9601028
    Blast Score: 84
    Syntaxin; Syntaxin
  7. XM_005260365.2XP_005260422.1  

    Conserved Domains (6) summary
    cd05841
    Location:271351
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:153251
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:9581027
    Blast Score: 94
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:92132
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10301064
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:414624
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
  8. XM_006723768.1XP_006723831.1  

    Conserved Domains (6) summary
    cd05841
    Location:271351
    Blast Score: 388
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:153251
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:92132
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:9841018
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:414624
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:914982
    Blast Score: 84
    Syntaxin; Syntaxin
  9. XM_005260371.2XP_005260428.1  

    Conserved Domains (6) summary
    cd05841
    Location:271351
    Blast Score: 389
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:153251
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:92132
    Blast Score: 140
    PHD; PHD-finger
    pfam01753
    Location:9841018
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:414624
    Blast Score: 777
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:914982
    Blast Score: 84
    Syntaxin; Syntaxin
  10. XM_005260377.2XP_005260434.1  

    Conserved Domains (6) summary
    cd05841
    Location:271351
    Blast Score: 389
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:153251
    Blast Score: 497
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:831900
    Blast Score: 94
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:92132
    Blast Score: 138
    PHD; PHD-finger
    pfam01753
    Location:903937
    Blast Score: 127
    zf-MYND; MYND finger
    pfam12064
    Location:414624
    Blast Score: 780
    DUF3544; Domain of unknown function (DUF3544)
  11. XM_005260366.2XP_005260423.1  

    See proteins identical to XP_005260423.1

    UniProtKB/Swiss-Prot
    Q9ULU4
    Related
    ENSP00000312237, OTTHUMP00000043384
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:90130
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10281062
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9581026
    Blast Score: 84
    Syntaxin; Syntaxin
  12. XM_006723766.1XP_006723829.1  

    See proteins identical to XP_006723829.1

    Conserved Domains (6) summary
    cd05841
    Location:244324
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:126224
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:65105
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10031037
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:387597
    Blast Score: 776
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9331001
    Blast Score: 84
    Syntaxin; Syntaxin
  13. XM_006723762.1XP_006723825.1  

    See proteins identical to XP_006723825.1

    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 385
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:90130
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10281062
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9581026
    Blast Score: 85
    Syntaxin; Syntaxin
  14. XM_005260360.2XP_005260417.1  

    See proteins identical to XP_005260417.1

    UniProtKB/Swiss-Prot
    Q9ULU4
    Conserved Domains (6) summary
    cd05841
    Location:269349
    Blast Score: 385
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:151249
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:90130
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10281062
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:412622
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9581026
    Blast Score: 85
    Syntaxin; Syntaxin
  15. XM_005260364.2XP_005260421.1  

    See proteins identical to XP_005260421.1

    Conserved Domains (6) summary
    cd05841
    Location:244324
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:126224
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:65105
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10031037
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:387597
    Blast Score: 776
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9331001
    Blast Score: 84
    Syntaxin; Syntaxin
  16. XM_006723767.1XP_006723830.1  

    See proteins identical to XP_006723830.1

    Conserved Domains (6) summary
    cd05841
    Location:244324
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:126224
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:65105
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10031037
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:387597
    Blast Score: 776
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9331001
    Blast Score: 84
    Syntaxin; Syntaxin
  17. XM_006723763.1XP_006723826.1  

    Conserved Domains (6) summary
    cd05841
    Location:263343
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:145243
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    PRK05759
    Location:9501019
    Blast Score: 95
    PRK05759; F0F1 ATP synthase subunit B; Validated
    pfam00628
    Location:84124
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10221056
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:406616
    Blast Score: 775
    DUF3544; Domain of unknown function (DUF3544)
  18. XM_006723760.1XP_006723823.1  

    Conserved Domains (6) summary
    cd05841
    Location:288368
    Blast Score: 387
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:170268
    Blast Score: 500
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:109149
    Blast Score: 142
    PHD; PHD-finger
    pfam01753
    Location:10471081
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:431641
    Blast Score: 778
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9771045
    Blast Score: 84
    Syntaxin; Syntaxin
  19. XM_006723764.1XP_006723827.1  

    Conserved Domains (6) summary
    cd05841
    Location:263343
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:145243
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:84124
    Blast Score: 141
    PHD; PHD-finger
    pfam01753
    Location:10221056
    Blast Score: 128
    zf-MYND; MYND finger
    pfam12064
    Location:406616
    Blast Score: 779
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9521020
    Blast Score: 85
    Syntaxin; Syntaxin
  20. XM_005260358.2XP_005260415.1  

    Conserved Domains (6) summary
    cd05841
    Location:288368
    Blast Score: 386
    BS69_related; The PWWP domain is part of BS69 protein, a nuclear protein that specifically binds adenoviral E1A and Epstein-Barr viral EBNA2 proteins, suppressing their transactivation functions. BS69 is a multi-domain protein, containing bromo, PHD, PWWP, and MYND ...
    cd05508
    Location:170268
    Blast Score: 501
    Bromo_RACK7; Bromodomain, RACK7_like subfamily. RACK7 (also called human protein kinase C-binding protein) was identified as a potential tumor suppressor genes, it shares domain architecture with BS69/ZMYND11; both have been implicated in the regulation of cellular ...
    pfam00628
    Location:109149
    Blast Score: 142
    PHD; PHD-finger
    pfam01753
    Location:10471081
    Blast Score: 129
    zf-MYND; MYND finger
    pfam12064
    Location:431641
    Blast Score: 780
    DUF3544; Domain of unknown function (DUF3544)
    cl00143
    Location:9771045
    Blast Score: 85
    Syntaxin; Syntaxin

Alternate HuRef

Genomic

  1. AC_000152.1 

    Range
    42581324..42728589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018931.2 

    Range
    45740753..45888521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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