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KCTD2 potassium channel tetramerization domain containing 2 [ Homo sapiens (human) ]

Gene ID: 23510, updated on 26-May-2016
Official Symbol
KCTD2provided by HGNC
Official Full Name
potassium channel tetramerization domain containing 2provided by HGNC
Primary source
HGNC:HGNC:21294
See related
Ensembl:ENSG00000180901 HPRD:17176; MIM:613422; Vega:OTTHUMG00000179276
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
17q25.1
Exon count:
10
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 17 NC_000017.11 (75032567..75065889)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (73043279..73061981)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene cerebellar degeneration related protein 2 like Neighboring gene immature colon carcinoma transcript 1 Neighboring gene transfer RNA-Arg (CCT) 1-1 Neighboring gene transfer RNA-Arg (CCT) 2-1 Neighboring gene transfer RNA-Arg (TCG) 3-1 Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex subunit D Neighboring gene solute carrier family 16 member 5 Neighboring gene uncharacterized LOC105371895 Neighboring gene armadillo repeat containing 7

NHGRI GWAS Catalog

Description
Whole genome association scan for genetic polymorphisms influencing information processing speed.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ18320, KIAA0176

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein complex binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
BTB/POZ domain-containing protein KCTD2
Names
potassium channel tetramerisation domain containing 2
potassium channel tetramerization domain-containing protein 2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015353.2NP_056168.1  BTB/POZ domain-containing protein KCTD2

    See identical proteins and their annotated locations for NP_056168.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the protein.
    Source sequence(s)
    AI871166, BC033329, CD742648, D79998, DB460074
    Consensus CDS
    CCDS32728.1
    UniProtKB/Swiss-Prot
    Q14681
    UniProtKB/TrEMBL
    Q8IYY2
    Related
    ENSP00000312814, OTTHUMP00000261036, ENST00000322444, OTTHUMT00000445538
    Conserved Domains (1) summary
    pfam02214
    Location:74164
    BTB_2; BTB/POZ domain

RNA

  1. NR_110834.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate segment in the 5' region, compared to variant 1. This variant is represented as non-coding because the in-frame ORF does not meet RefSeq quality criteria.
    Source sequence(s)
    AC087651, AI871166, BC033329, CD742648
    Related
    ENST00000375286, OTTHUMT00000445537
  2. NR_110835.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an exon and contains three alternate 5' exons, compared to variant 1. This variant is represented as non-coding because the in-frame ORF does not meet RefSeq quality criteria.
    Source sequence(s)
    AI871166, AK307083, BC033329, CD742648, DA408645

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p2 Primary Assembly

    Range
    75032567..75065889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011524575.1XP_011522877.1  

    Conserved Domains (1) summary
    pfam02214
    Location:74164
    BTB_2; BTB/POZ domain

Alternate CHM1_1.1

Genomic

  1. NC_018928.2 Alternate CHM1_1.1

    Range
    73093458..73126463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)