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    FLNB filamin B, beta [ Homo sapiens (human) ]

    Gene ID: 2317, updated on 18-May-2013
    Official Symbol
    FLNBprovided by HGNC
    Official Full Name
    filamin B, betaprovided by HGNC
    Primary source
    HGNC:3755
    See related
    Ensembl:ENSG00000136068; HPRD:04543; MIM:603381; Vega:OTTHUMG00000159158
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    AOI; FH1; SCT; TAP; LRS1; TABP; FLN-B; FLN1L; ABP-278; ABP-280
    Summary
    This gene encodes a member of the filamin family. The encoded protein interacts with glycoprotein Ib alpha as part of the process to repair vascular injuries. The platelet glycoprotein Ib complex includes glycoprotein Ib alpha, and it binds the actin cytoskeleton. Mutations in this gene have been found in several conditions: atelosteogenesis type 1 and type 3; boomerang dysplasia; autosomal dominant Larsen syndrome; and spondylocarpotarsal synostosis syndrome. Multiple alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Nov 2009]
    Location :
    3p14.3
    Sequence :
    Chromosome: 3; NC_000003.11 (57994127..58157982)
    See FLNB in Epigenomics, MapViewer

    Chromosome 3 - NC_000003.11Genomic Context describing neighboring genes Neighboring gene sarcolemma associated protein Neighboring gene pyruvate dehydrogenase (lipoamide) alpha 1 pseudogene 1 Neighboring gene peptidylprolyl isomerase A (cyclophilin A) pseudogene 16 Neighboring gene FLNB antisense RNA 1 Neighboring gene deoxyribonuclease I-like 3 Neighboring gene abhydrolase domain containing 6

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Atelosteogenesis type 1

    Summary from GeneReviews: FLNB-Related Disorders Go to GeneReviews

    Disease Characteristics
    The FLNB-related disorders include a spectrum of phenotypes ranging from mild (spondylocarpotarsal synostosis [SCT] syndrome and Larsen syndrome) to severe (atelosteogenesis types I [AOI] and III [AOIII], boomerang dysplasia). SCT syndrome is characterized by disproportionate short stature, block vertebrae, scoliosis and lordosis, carpal and tarsal fusion, club feet, hearing loss, dental enamel hypoplasia, and mild facial dysmorphisms. Larsen syndrome is characterized by congenital dislocations of the hip, knee, and elbow; club feet (equinovarus or equinovalgus foot deformities); scoliosis and cervical kyphosis, which can be associated with a cervical myelopathy; short, broad, spatulate distal phalanges; and distinctive craniofacies (prominent forehead, depressed nasal bridge, flattened midface, and ocular hypertelorism). Both can have midline cleft palate and conductive hearing loss. AOIII and AOI are characterized by severe short-limbed dwarfism; dislocated hips, knees, and elbows; and club feet. AOI is lethal in the perinatal period.
    Diagnosis Testing
    Diagnosis is based on clinical and radiographic findings and confirmed with FLNB molecular genetic testing.
    Genetic Counseling
    AOI, AOIII, boomerang dysplasia, and Larsen syndrome are inherited in an autosomal dominant manner. The proportion of autosomal dominant FLNB-related disorders caused by de novo mutations is unknown, although the vast majority of lethal FLNB-related conditions are caused by de novo events. In rare instances, a parent with low-level mosaicism transmits the causative mutation to an affected offspring. Each child of an individual with an autosomal dominant FLNB-related disorder has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk for autosomal dominant FLNB-related disorders is possible if the disease-causing mutation in the family is known. SCT syndrome is inherited in an autosomal recessive manner. At conception, each sib of an individual with SCT syndrome has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for SCT syndrome are possible once the disease-causing mutations have been identified in the family.
    References

    Atelosteogenesis type 3

    Summary from GeneReviews: FLNB-Related Disorders Go to GeneReviews

    Disease Characteristics
    The FLNB-related disorders include a spectrum of phenotypes ranging from mild (spondylocarpotarsal synostosis [SCT] syndrome and Larsen syndrome) to severe (atelosteogenesis types I [AOI] and III [AOIII], boomerang dysplasia). SCT syndrome is characterized by disproportionate short stature, block vertebrae, scoliosis and lordosis, carpal and tarsal fusion, club feet, hearing loss, dental enamel hypoplasia, and mild facial dysmorphisms. Larsen syndrome is characterized by congenital dislocations of the hip, knee, and elbow; club feet (equinovarus or equinovalgus foot deformities); scoliosis and cervical kyphosis, which can be associated with a cervical myelopathy; short, broad, spatulate distal phalanges; and distinctive craniofacies (prominent forehead, depressed nasal bridge, flattened midface, and ocular hypertelorism). Both can have midline cleft palate and conductive hearing loss. AOIII and AOI are characterized by severe short-limbed dwarfism; dislocated hips, knees, and elbows; and club feet. AOI is lethal in the perinatal period.
    Diagnosis Testing
    Diagnosis is based on clinical and radiographic findings and confirmed with FLNB molecular genetic testing.
    Genetic Counseling
    AOI, AOIII, boomerang dysplasia, and Larsen syndrome are inherited in an autosomal dominant manner. The proportion of autosomal dominant FLNB-related disorders caused by de novo mutations is unknown, although the vast majority of lethal FLNB-related conditions are caused by de novo events. In rare instances, a parent with low-level mosaicism transmits the causative mutation to an affected offspring. Each child of an individual with an autosomal dominant FLNB-related disorder has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk for autosomal dominant FLNB-related disorders is possible if the disease-causing mutation in the family is known. SCT syndrome is inherited in an autosomal recessive manner. At conception, each sib of an individual with SCT syndrome has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for SCT syndrome are possible once the disease-causing mutations have been identified in the family.
    References

    Boomerang dysplasia

    Summary from GeneReviews: FLNB-Related Disorders Go to GeneReviews

    Disease Characteristics
    The FLNB-related disorders include a spectrum of phenotypes ranging from mild (spondylocarpotarsal synostosis [SCT] syndrome and Larsen syndrome) to severe (atelosteogenesis types I [AOI] and III [AOIII], boomerang dysplasia). SCT syndrome is characterized by disproportionate short stature, block vertebrae, scoliosis and lordosis, carpal and tarsal fusion, club feet, hearing loss, dental enamel hypoplasia, and mild facial dysmorphisms. Larsen syndrome is characterized by congenital dislocations of the hip, knee, and elbow; club feet (equinovarus or equinovalgus foot deformities); scoliosis and cervical kyphosis, which can be associated with a cervical myelopathy; short, broad, spatulate distal phalanges; and distinctive craniofacies (prominent forehead, depressed nasal bridge, flattened midface, and ocular hypertelorism). Both can have midline cleft palate and conductive hearing loss. AOIII and AOI are characterized by severe short-limbed dwarfism; dislocated hips, knees, and elbows; and club feet. AOI is lethal in the perinatal period.
    Diagnosis Testing
    Diagnosis is based on clinical and radiographic findings and confirmed with FLNB molecular genetic testing.
    Genetic Counseling
    AOI, AOIII, boomerang dysplasia, and Larsen syndrome are inherited in an autosomal dominant manner. The proportion of autosomal dominant FLNB-related disorders caused by de novo mutations is unknown, although the vast majority of lethal FLNB-related conditions are caused by de novo events. In rare instances, a parent with low-level mosaicism transmits the causative mutation to an affected offspring. Each child of an individual with an autosomal dominant FLNB-related disorder has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk for autosomal dominant FLNB-related disorders is possible if the disease-causing mutation in the family is known. SCT syndrome is inherited in an autosomal recessive manner. At conception, each sib of an individual with SCT syndrome has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for SCT syndrome are possible once the disease-causing mutations have been identified in the family.
    References

    Larsen syndrome, dominant type

    Summary from GeneReviews: FLNB-Related Disorders Go to GeneReviews

    Disease Characteristics
    The FLNB-related disorders include a spectrum of phenotypes ranging from mild (spondylocarpotarsal synostosis [SCT] syndrome and Larsen syndrome) to severe (atelosteogenesis types I [AOI] and III [AOIII], boomerang dysplasia). SCT syndrome is characterized by disproportionate short stature, block vertebrae, scoliosis and lordosis, carpal and tarsal fusion, club feet, hearing loss, dental enamel hypoplasia, and mild facial dysmorphisms. Larsen syndrome is characterized by congenital dislocations of the hip, knee, and elbow; club feet (equinovarus or equinovalgus foot deformities); scoliosis and cervical kyphosis, which can be associated with a cervical myelopathy; short, broad, spatulate distal phalanges; and distinctive craniofacies (prominent forehead, depressed nasal bridge, flattened midface, and ocular hypertelorism). Both can have midline cleft palate and conductive hearing loss. AOIII and AOI are characterized by severe short-limbed dwarfism; dislocated hips, knees, and elbows; and club feet. AOI is lethal in the perinatal period.
    Diagnosis Testing
    Diagnosis is based on clinical and radiographic findings and confirmed with FLNB molecular genetic testing.
    Genetic Counseling
    AOI, AOIII, boomerang dysplasia, and Larsen syndrome are inherited in an autosomal dominant manner. The proportion of autosomal dominant FLNB-related disorders caused by de novo mutations is unknown, although the vast majority of lethal FLNB-related conditions are caused by de novo events. In rare instances, a parent with low-level mosaicism transmits the causative mutation to an affected offspring. Each child of an individual with an autosomal dominant FLNB-related disorder has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk for autosomal dominant FLNB-related disorders is possible if the disease-causing mutation in the family is known. SCT syndrome is inherited in an autosomal recessive manner. At conception, each sib of an individual with SCT syndrome has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for SCT syndrome are possible once the disease-causing mutations have been identified in the family.
    References

    Spondylocarpotarsal synostosis syndrome

    Summary from GeneReviews: FLNB-Related Disorders Go to GeneReviews

    Disease Characteristics
    The FLNB-related disorders include a spectrum of phenotypes ranging from mild (spondylocarpotarsal synostosis [SCT] syndrome and Larsen syndrome) to severe (atelosteogenesis types I [AOI] and III [AOIII], boomerang dysplasia). SCT syndrome is characterized by disproportionate short stature, block vertebrae, scoliosis and lordosis, carpal and tarsal fusion, club feet, hearing loss, dental enamel hypoplasia, and mild facial dysmorphisms. Larsen syndrome is characterized by congenital dislocations of the hip, knee, and elbow; club feet (equinovarus or equinovalgus foot deformities); scoliosis and cervical kyphosis, which can be associated with a cervical myelopathy; short, broad, spatulate distal phalanges; and distinctive craniofacies (prominent forehead, depressed nasal bridge, flattened midface, and ocular hypertelorism). Both can have midline cleft palate and conductive hearing loss. AOIII and AOI are characterized by severe short-limbed dwarfism; dislocated hips, knees, and elbows; and club feet. AOI is lethal in the perinatal period.
    Diagnosis Testing
    Diagnosis is based on clinical and radiographic findings and confirmed with FLNB molecular genetic testing.
    Genetic Counseling
    AOI, AOIII, boomerang dysplasia, and Larsen syndrome are inherited in an autosomal dominant manner. The proportion of autosomal dominant FLNB-related disorders caused by de novo mutations is unknown, although the vast majority of lethal FLNB-related conditions are caused by de novo events. In rare instances, a parent with low-level mosaicism transmits the causative mutation to an affected offspring. Each child of an individual with an autosomal dominant FLNB-related disorder has a 50% chance of inheriting the mutation. Prenatal testing for pregnancies at increased risk for autosomal dominant FLNB-related disorders is possible if the disease-causing mutation in the family is known. SCT syndrome is inherited in an autosomal recessive manner. At conception, each sib of an individual with SCT syndrome has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for SCT syndrome are possible once the disease-causing mutations have been identified in the family.
    References
    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env HIV-1 gp120 promotes filamin binding to both CD4 and CXCR4 PubMed
    pol gag-pol A number of focal adhesion plaque proteins are specifically cleaved by HIV-1 protease, including fimbrin, focal adhesion plaque kinase (FAK), talin, and, to a lesser extent, filamin, spectrin and fibronectin PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    O75369 Activating transcription factor 7 interacting protein ATF7IP    HPRD  PubMed  
    O75369 Q8WUP2 FBLIM1    HPRD  PubMed  
    O75369 P21333 FLNA    HPRD  PubMed  
    O75369 O75369 FLNB    HPRD  PubMed  
    O75369 P07359 GP1BA    HPRD  PubMed  
    O75369 P05556 ITGB1    HPRD  PubMed  
    O75369 O15259 NPHP1    HPRD  PubMed  
    O75369 P49768 PSEN1    HPRD  PubMed  
    O75369 P49810 PSEN2    HPRD  PubMed  
    O75369 Q9HAU4 SMURF2    HPRD  PubMed  
    O75369 P16473 TSHR    HPRD  PubMed  
    BioGRID:108606 BioGRID:119674 ASB2    BioGRID  PubMed Biochemical Activity 
    BioGRID:108606 BioGRID:107452 CDK2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:107858 CSTB    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:115794 DCTN2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:116418 DCTN3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:199230 Dlg4    BioGRID  PubMed Protein-peptide 
    BioGRID:108606 BioGRID:108403 ESR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:120128 FBLIM1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:108606 BioGRID:108605 FLNA    BioGRID  PubMed Affinity Capture-Western; Co-fractionation; Two-hybrid 
    BioGRID:108606 BioGRID:108607 FLNC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:107208 FMNL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:108621 FN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:115448 G3BP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:109073 GP1BA    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:108606 BioGRID:116149 HNRNPA0    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:110751 HNRNPM    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:114995 ISG15    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:109883 ITGA4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:109894 ITGB1    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:108606 BioGRID:109896 ITGB3    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:109900 ITGB6    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:125817 LEO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:113971 MAD1L1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:110378 MAP3K1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108606 BioGRID:110380 MAP3K4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108606 BioGRID:111585 MAPK8    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108606 BioGRID:115014 MDC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:110438 MLH1    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:110927 NPHP1    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:116831 NUP210    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:128638 OTUD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:119355 PLEKHO1    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:111642 PSEN1    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:108606 BioGRID:111643 PSEN2    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:108606 BioGRID:111690 PSMD12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:111682 PSMD3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:111817 RAC1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:108606 BioGRID:111822 RAD21    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:116015 SEPT9    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:119602 SIRT7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:122265 SMURF2    BioGRID  PubMed Two-hybrid 
    BioGRID:108606 BioGRID:114397 SQSTM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:113104 TSHR    BioGRID  PubMed Protein-peptide 
    BioGRID:108606 BioGRID:114755 TXNL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:116934 UBR4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:113255 VCAM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:108606 BioGRID:113258 VCP    BioGRID  PubMed Co-fractionation 
    BioGRID:108606 BioGRID:116818 ZC3H4    BioGRID  PubMed Co-fractionation 
    • Antiviral mechanism by IFN-stimulated genes, organism-specific biosystem (from REACTOME)
      Antiviral mechanism by IFN-stimulated genes, organism-specific biosystemThe ISG proteins generated by IFN pathways plays key roles in the induction of innate and adaptive immune responses.
    • Cytokine Signaling in Immune system, organism-specific biosystem (from REACTOME)
      Cytokine Signaling in Immune system, organism-specific biosystemCytokines are small proteins that regulate and mediate immunity, inflammation, and hematopoiesis. They are secreted in response to immune stimuli, and usually act briefly, locally, at very low concen...
    • Focal adhesion, organism-specific biosystem (from KEGG)
      Focal adhesion, organism-specific biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • Focal adhesion, conserved biosystem (from KEGG)
      Focal adhesion, conserved biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • ISG15 antiviral mechanism, organism-specific biosystem (from REACTOME)
      ISG15 antiviral mechanism, organism-specific biosystemInterferon-stimulated gene 15 (ISG15) is a member of the ubiquitin-like (Ubl) family. It is strongly induced upon exposure to type I Interferons (IFNs), viruses, bacterial LPS, and other stresses. On...
    • Immune System, organism-specific biosystem (from REACTOME)
      Immune System, organism-specific biosystemHumans are exposed to millions of potential pathogens daily, through contact, ingestion, and inhalation. Our ability to avoid infection depends on the adaptive immune system and during the first crit...
    • Interferon Signaling, organism-specific biosystem (from REACTOME)
      Interferon Signaling, organism-specific biosystemInterferons (IFNs) are cytokines that play a central role in initiating immune responses, especially antiviral and antitumor effects. There are three types of IFNs:Type I (IFN-alpha, -beta and others...
    • MAPK signaling pathway, organism-specific biosystem (from KEGG)
      MAPK signaling pathway, organism-specific biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • MAPK signaling pathway, conserved biosystem (from KEGG)
      MAPK signaling pathway, conserved biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • Proteoglycans in cancer, organism-specific biosystem (from KEGG)
      Proteoglycans in cancer, organism-specific biosystemMany proteoglycans (PGs) in the tumor microenvironment have been shown to be key macromolecules that contribute to biology of various types of cancer including proliferation, adhesion, angiogenesis a...
    • Proteoglycans in cancer, conserved biosystem (from KEGG)
      Proteoglycans in cancer, conserved biosystemMany proteoglycans (PGs) in the tumor microenvironment have been shown to be key macromolecules that contribute to biology of various types of cancer including proliferation, adhesion, angiogenesis a...
    • Salmonella infection, organism-specific biosystem (from KEGG)
      Salmonella infection, organism-specific biosystemSalmonella infection usually presents as a self-limiting gastroenteritis or the more severe typhoid fever and bacteremia. The common disease-causing Salmonella species in human is a single species, S...
    • Salmonella infection, conserved biosystem (from KEGG)
      Salmonella infection, conserved biosystemSalmonella infection usually presents as a self-limiting gastroenteritis or the more severe typhoid fever and bacteremia. The common disease-causing Salmonella species in human is a single species, S...

    Markers

    Homology

    Clone Names

    • DKFZp686O033, DKFZp686A1668

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    actin binding NAS
    Non-traceable Author Statement
    more info
    PubMed 
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    actin cytoskeleton organization TAS
    Traceable Author Statement
    more info
    PubMed 
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    cytokine-mediated signaling pathway TAS
    Traceable Author Statement
    more info
     
    cytoskeletal anchoring at plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    signal transduction TAS
    Traceable Author Statement
    more info
    PubMed 
    skeletal muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Z disc IEA
    Inferred from Electronic Annotation
    more info
     
    actin cytoskeleton TAS
    Traceable Author Statement
    more info
    PubMed 
    cell cortex IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IDA
    Inferred from Direct Assay
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    focal adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    integral to membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    plasma membrane IDA
    Inferred from Direct Assay
    more info
     
    stress fiber IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    filamin-B
    Names
    filamin-B
    filamin-3
    beta-filamin
    ABP-280 homolog
    filamin homolog 1
    thyroid autoantigen
    actin binding protein 278
    actin-binding-like protein
    Larsen syndrome 1 (autosomal dominant)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012801.1 RefSeqGene

      Range
      5001..168856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001164317.1NP_001157789.1  filamin-B isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest protein (isoform 1).
      Source sequence(s)
      AB371580, AC114399, AC137936
      Consensus CDS
      CCDS54599.1
      UniProtKB/Swiss-Prot
      O75369
      Related
      ENSP00000420213, OTTHUMP00000214208, ENST00000490882, OTTHUMT00000353570
      Conserved Domains (3) summary
      cd00014
      Location:17121
      Blast Score: 247
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      smart00557
      Location:18551941
      Blast Score: 288
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:10371124
      Blast Score: 249
      Filamin; Filamin/ABP280 repeat
    2. NM_001164318.1NP_001157790.1  filamin-B isoform 3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame exon and uses an alternate splice site in the 3' coding region compared to variant 1. The resulting protein (isoform 3) is shorter compared to isoform 1.
      Source sequence(s)
      AB191258, AC114399, AC137936
      Consensus CDS
      CCDS54600.1
      UniProtKB/Swiss-Prot
      O75369
      Related
      ENSP00000415599, OTTHUMP00000214211, ENST00000429972, OTTHUMT00000353573
      Conserved Domains (3) summary
      cd00014
      Location:17121
      Blast Score: 248
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      smart00557
      Location:18131899
      Blast Score: 288
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:10371124
      Blast Score: 249
      Filamin; Filamin/ABP280 repeat
    3. NM_001164319.1NP_001157791.1  filamin-B isoform 4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) lacks two alternate in-frame exons in the 3' coding regions compared to variant 1. The resulting protein (isoform 4) is shorter compared to isoform 1.
      Source sequence(s)
      AB371581, AC114399, AC137936, AL699183
      Consensus CDS
      CCDS54601.1
      UniProtKB/Swiss-Prot
      O75369
      Related
      ENSP00000351339, OTTHUMP00000214209, ENST00000358537, OTTHUMT00000353571
      Conserved Domains (3) summary
      cd00014
      Location:17121
      Blast Score: 248
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      smart00557
      Location:18001886
      Blast Score: 288
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:10371124
      Blast Score: 249
      Filamin; Filamin/ABP280 repeat
    4. NM_001457.3NP_001448.2  filamin-B isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The resulting protein (isoform 2) is shorter compared to isoform 1.
      Source sequence(s)
      AB209889, AB371582, AC137936, AF043045
      Consensus CDS
      CCDS2885.1
      UniProtKB/Swiss-Prot
      O75369
      Related
      ENSP00000295956, OTTHUMP00000214207, ENST00000295956, OTTHUMT00000353569
      Conserved Domains (3) summary
      cd00014
      Location:17121
      Blast Score: 248
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      smart00557
      Location:18241910
      Blast Score: 288
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:10371124
      Blast Score: 249
      Filamin; Filamin/ABP280 repeat

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000003.11 Reference GRCh37.p10 Primary Assembly

      Range
      57994127..58157982
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000135.1 Alternate HuRef

      Range
      58091507..58255398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018914.1 Alternate CHM1_1.0

      Range
      57945453..58109389
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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