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    NACAD NAC alpha domain containing [ Homo sapiens ]

    Gene ID: 23148, updated on 11-May-2012
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    Summary

    Official Symbol
    NACADprovided by HGNC
    Official Full Name
    NAC alpha domain containingprovided by HGNC
    Primary source
    HGNC:22196
    See related
    Ensembl:ENSG00000136274; Vega:OTTHUMG00000159170
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    KIAA0363
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    Genomic context

    Location :
    7p13
    Sequence :
    Chromosome: 7; NC_000007.13 (45120036..45128493, complement)
    See NACAD in Epigenomics, MapViewer

    Chromosome 7 - NC_000007.13Genomic Context describing neighboring genes Neighboring gene cerebral cavernous malformation 2 Neighboring gene uncharacterized LOC100128364 Neighboring gene transforming growth factor beta regulator 4 Neighboring gene small nucleolar RNA, H/ACA box 5A Neighboring gene small nucleolar RNA, H/ACA box 5C

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A directed protein interaction network for investigating intracellular signal transduction. Vinayagam A, et al. Sci Signal, 2011 Sep 6. PMID 21900206.
    2. The DNA sequence of human chromosome 7. Hillier LW, et al. Nature, 2003 Jul 10. PMID 12853948.
    3. Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. Nagase T, et al. DNA Res, 1997 Apr 28. PMID 9205841.
    4. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548.

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:116763 BioGRID:117156 CBLC    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:115330 HDAC6    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:111809 MAP4K2    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:109407 NR4A1    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:111719 PTK2    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:112146 RPS27    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:112992 TNNT1    BioGRID  PubMed Two-hybrid 
    BioGRID:116763 BioGRID:121317 YAE1D1    BioGRID  PubMed Two-hybrid 
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    General gene information

    Markers

    Genotypes

    Homology

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Preferred Names
    NAC-alpha domain-containing protein 1
    Names
    NAC-alpha domain-containing protein 1
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001146334.1 → NP_001139806.1  NAC-alpha domain-containing protein 1

      Status: VALIDATED

      Source sequence(s)
      AB002361, AC013416, BM680676, BM728120, EG328798
      Consensus CDS
      CCDS47582.1
      UniProtKB/Swiss-Prot
      O15069
      Related
      ENSP00000420477, OTTHUMP00000214258, ENST00000490531, OTTHUMT00000353652
      Conserved Domains (3) summary
      COG1308
      Location:1415 – 1562
      Blast Score: 149
      EGD2; Transcription factor homologous to NACalpha-BTF3 [Transcription]
      PHA03247
      Location:525 – 908
      Blast Score: 100
      PHA03247; large tegument protein UL36; Provisional
      pfam01849
      Location:1422 – 1471
      Blast Score: 197
      NAC; NAC domain

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000007.13 Reference GRCh37.p5 Primary Assembly

      Range
      45120036..45128493, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000139.1 Alternate HuRef

      Range
      45004007..45012344, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CRA_TCAGchr7v2

    Genomic

    1. AC_000068.1 Alternate CRA_TCAGchr7v2

      Range
      45159326..45167663, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC013416.4 (70850..80052) None
    genomic CH236960.1 (640486..648782) None
    mRNA AB002361.1 BAA20818.1
    mRNA BM680676.1 None
    mRNA BM728120.1 None
    mRNA EG328798.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    O15069.3 GenPept UniProtKB/Swiss-Prot:O15069
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
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