These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_032912.1 RefSeqGene
- Range
- 12382..131733
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001167681.2 → NP_001161153.1 Friend leukemia integration 1 transcription factor isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains a distinct 5' UTR and uses a downstream in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI354789, AK300153, AP001122, DC381599
- Consensus CDS
-
CCDS53725.1
- UniProtKB/Swiss-Prot
-
Q01543
- Related
- ENSP00000339627, ENST00000344954
- Conserved Domains (2) summary
-
- pfam00178
Location:247 – 330
Blast Score: 425
- Ets; Ets-domain
- cd08541
Location:81 – 171
Blast Score: 471
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
-
NM_001271010.1 → NP_001257939.1 Friend leukemia integration 1 transcription factor isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains a distinct 5' UTR and 5' coding region, and uses an alternate start codon, compared to variant 1. The encoded isoform (3) has a distinct and shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AI354789, AK313370, AP001122, DC381599, M93255
- Consensus CDS
-
CCDS59231.1
- UniProtKB/Swiss-Prot
-
Q01543
- Related
- ENSP00000281428, ENST00000281428
- Conserved Domains (2) summary
-
- pfam00178
Location:214 – 297
Blast Score: 425
- Ets; Ets-domain
- cd08541
Location:48 – 138
Blast Score: 473
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
-
NM_001271012.1 → NP_001257941.1 Friend leukemia integration 1 transcription factor isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region and two alternate internal exons, and uses an alternate start codon, compared to variant 1. The encoded isoform (4) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AI354789, AK294279, AP001122
- Consensus CDS
-
CCDS59230.1
- UniProtKB/TrEMBL
-
B4DFV4
- Conserved Domains (1) summary
-
- pfam00178
Location:87 – 170
Blast Score: 428
- Ets; Ets-domain
-
NM_002017.4 → NP_002008.2 Friend leukemia integration 1 transcription factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AI354789, AK313370, AP001122, DC381599
- Consensus CDS
-
CCDS44768.1
- UniProtKB/Swiss-Prot
-
Q01543
- Conserved Domains (2) summary
-
- pfam00178
Location:280 – 363
Blast Score: 428
- Ets; Ets-domain
- cd08541
Location:114 – 204
Blast Score: 474
- SAM_PNT-FLI-1; Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p10 Primary Assembly
Genomic
-
NC_000011.9 Reference GRCh37.p10 Primary Assembly
- Range
- 128556430..128683162
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000143.1 Alternate HuRef
- Range
- 124504750..124631960
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CHM1_1.0
Genomic
-
NC_018922.1 Alternate CHM1_1.0
- Range
- 128425586..128552403
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)