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Gnl2 guanine nucleotide binding protein-like 2 (nucleolar) [ Mus musculus (house mouse) ]

Gene ID: 230737, updated on 8-May-2016
Official Symbol
Gnl2provided by MGI
Official Full Name
guanine nucleotide binding protein-like 2 (nucleolar)provided by MGI
Primary source
MGI:MGI:2385207
See related
Ensembl:ENSMUSG00000028869 Vega:OTTMUSG00000009250
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ngp-1; BC003262; HUMAUANTIG
Orthologs
Location:
4; 4 D2.2
Exon count:
18
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (125029988..125055382)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (124707258..124732626)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene R-spondin 1 Neighboring gene predicted gene, 38472 Neighboring gene dynein, axonemal, light intermediate polypeptide 1 Neighboring gene Smad nuclear interacting protein 1 Neighboring gene splicing factor 3a, subunit 2 pseudogene

  • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
  • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • MGC7863

Gene Ontology Provided by MGI

Function Evidence Code Pubs
GTP binding IEA
Inferred from Electronic Annotation
more info
 
GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
ribosome biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
membrane ISO
Inferred from Sequence Orthology
more info
 
nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
nucleolar GTP-binding protein 2
Names
testicular antigen

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145552.2NP_663527.2  nucleolar GTP-binding protein 2

    See identical proteins and their annotated locations for NP_663527.2

    Status: VALIDATED

    Source sequence(s)
    AK037796, AK077532, AV236719, BY140435
    Consensus CDS
    CCDS18634.1
    UniProtKB/Swiss-Prot
    Q99LH1
    UniProtKB/TrEMBL
    Q3V3N5
    Related
    ENSMUSP00000030684, OTTMUSP00000009597, ENSMUST00000030684, OTTMUST00000020939
    Conserved Domains (3) summary
    cd01858
    Location:209365
    NGP_1; A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:190466
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
    pfam08153
    Location:43174
    NGP1NT; NGP1NT (NUC091) domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    125029988..125055382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011240501.1XP_011238803.1  

    Conserved Domains (2) summary
    cd01858
    Location:2154
    NGP_1; A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:2255
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
  2. XM_006503029.2XP_006503092.1  

    Conserved Domains (2) summary
    cd01858
    Location:50206
    NGP_1; A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:31307
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
  3. XM_011240502.1XP_011238804.1  

    Conserved Domains (2) summary
    cd01858
    Location:1136
    NGP_1; A novel nucleolar GTP-binding protein, circularly permuted subfamily of the Ras GTPases
    COG1161
    Location:1237
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]
  4. XM_006503033.2XP_006503096.1  

    Conserved Domains (1) summary
    COG1161
    Location:1113
    RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    123352902..123376773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)