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FOXD2 forkhead box D2 [ Homo sapiens (human) ]

Gene ID: 2306, updated on 12-May-2016
Official Symbol
FOXD2provided by HGNC
Official Full Name
forkhead box D2provided by HGNC
Primary source
HGNC:HGNC:3803
See related
Ensembl:ENSG00000186564 HPRD:03735; MIM:602211; Vega:OTTHUMG00000007950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FKHL17; FREAC9; FREAC-9
Summary
This gene belongs to the forkhead family of transcription factors which is characterized by a distinct forkhead domain. The specific function of this gene has not yet been determined. [provided by RefSeq, Jul 2008]
Orthologs
Location:
1p34-p32
Exon count:
1
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 1 NC_000001.11 (47436017..47440691)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (47901689..47906363)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1389 Neighboring gene forkhead box E3 Neighboring gene FOXD2 antisense RNA 1 (head to head) Neighboring gene ribosomal protein L21 pseudogene 24 Neighboring gene ATPase H+ transporting V0 subunit e1 pseudogene 4

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NHGRI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
NHGRI GWA Catalog
Pharmacogenomic study of side-effects for antidepressant treatment options in STAR*D.
NHGRI GWA Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
transcription factor activity, sequence-specific DNA binding TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
Preferred Names
forkhead box protein D2
Names
forkhead, drosophila, homolog-like 17
forkhead-like 17
forkhead-related activator 9
forkhead-related protein FKHL17
forkhead-related transcription factor 9

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_004474.3NP_004465.3  forkhead box protein D2

    See identical proteins and their annotated locations for NP_004465.3

    Status: REVIEWED

    Source sequence(s)
    AL607122
    Consensus CDS
    CCDS30708.1
    UniProtKB/Swiss-Prot
    O60548
    Related
    ENSP00000335493, OTTHUMP00000009656, ENST00000334793, OTTHUMT00000021831
    Conserved Domains (1) summary
    cd00059
    Location:127204
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p2 Primary Assembly

    Range
    47436017..47440691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018912.2 Alternate CHM1_1.1

    Range
    48018521..48023137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)