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Tmeff1 transmembrane protein with EGF-like and two follistatin-like domains 1 [ Mus musculus (house mouse) ]

Gene ID: 230157, updated on 8-May-2016
Official Symbol
Tmeff1provided by MGI
Official Full Name
transmembrane protein with EGF-like and two follistatin-like domains 1provided by MGI
Primary source
MGI:MGI:1926810
See related
Ensembl:ENSMUSG00000028347 Vega:OTTMUSG00000006852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tr1; M7365; A830033E11
Location:
4; 4 B2
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 4 NC_000070.6 (48585114..48663131)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (48598065..48676003)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene inversin Neighboring gene testis expressed gene 10 Neighboring gene Myb/SANT-like DNA-binding domain containing 3 Neighboring gene muscle-related coiled-coil protein Neighboring gene predicted gene, 42285

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
tomoregulin-1
Names
TR-1
transmembrane protein with EGF-like and one follistatin-like domain

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021436.2NP_067411.1  tomoregulin-1 precursor

    See identical proteins and their annotated locations for NP_067411.1

    Status: PROVISIONAL

    Source sequence(s)
    AL772151, AL807771
    Consensus CDS
    CCDS18168.1
    UniProtKB/Swiss-Prot
    Q6PFE7
    Related
    ENSMUSP00000030032, OTTMUSP00000007279, ENSMUST00000030032, OTTMUST00000015848
    Conserved Domains (2) summary
    PHA02887
    Location:267303
    PHA02887; EGF-like protein; Provisional
    cd00104
    Location:95135
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000070.6 Reference GRCm38.p3 C57BL/6J

    Range
    48585114..48663131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006537836.1XP_006537899.1  

    See identical proteins and their annotated locations for XP_006537899.1

    UniProtKB/Swiss-Prot
    Q6PFE7
    Related
    ENSMUSP00000121740, OTTMUSP00000007281, ENSMUST00000130834, OTTMUST00000015850
    Conserved Domains (2) summary
    PHA02887
    Location:268304
    PHA02887; EGF-like protein; Provisional
    cd00104
    Location:95135
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
  2. XM_006537837.1XP_006537900.1  

    UniProtKB/Swiss-Prot
    Q6PFE7
    Conserved Domains (2) summary
    PHA02887
    Location:266302
    PHA02887; EGF-like protein; Provisional
    cd00104
    Location:95135
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
  3. XM_006537838.1XP_006537901.1  

    Conserved Domains (2) summary
    PHA02887
    Location:265301
    PHA02887; EGF-like protein; Provisional
    cd00104
    Location:95135
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

Alternate Mm_Celera

Genomic

  1. AC_000026.1 Alternate Mm_Celera

    Range
    48608276..48686796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)