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Aamp angio-associated migratory protein [ Mus musculus (house mouse) ]

Gene ID: 227290, updated on 8-May-2016
Official Symbol
Aampprovided by MGI
Official Full Name
angio-associated migratory proteinprovided by MGI
Primary source
MGI:MGI:107809
See related
Ensembl:ENSMUSG00000006299 Vega:OTTMUSG00000047667
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Aamp-rs; AU040907
Orthologs
Location:
1 C3; 1 38.53 cM
Exon count:
12
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 1 NC_000067.6 (74279840..74284738, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (74326414..74331312, complement)

Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene actin related protein 2/3 complex, subunit 2 Neighboring gene G protein-coupled bile acid receptor 1 Neighboring gene paroxysmal nonkinesiogenic dyskinesia Neighboring gene transmembrane BAX inhibitor motif containing 1 Neighboring gene ciliogenesis associated TTC17 interacting protein

Markers

Homology

Clone Names

  • MGC30660

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
cell surface ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
intercellular bridge ISO
Inferred from Sequence Orthology
more info
 
microtubule cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
angio-associated migratory cell protein

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001190444.1NP_001177373.1  angio-associated migratory cell protein isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC113473
    Consensus CDS
    CCDS56631.1
    UniProtKB/TrEMBL
    J3QN89
    Related
    ENSMUSP00000136644, OTTMUSP00000067263, ENSMUST00000178235, OTTMUST00000122849
    Conserved Domains (3) summary
    smart00320
    Location:391429
    WD40; WD40 repeats
    COG2319
    Location:91432
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:88388
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. NM_146110.3NP_666222.2  angio-associated migratory cell protein isoform 2

    See identical proteins and their annotated locations for NP_666222.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
    Source sequence(s)
    AK162750, AV170929, BY101182
    Consensus CDS
    CCDS15043.1
    UniProtKB/TrEMBL
    Q3TJ22
    Related
    ENSMUSP00000006462, OTTMUSP00000067262, ENSMUST00000006462, OTTMUST00000122847
    Conserved Domains (3) summary
    smart00320
    Location:390428
    WD40; WD40 repeats
    COG2319
    Location:90431
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:87387
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000067.6 Reference GRCm38.p3 C57BL/6J

    Range
    74279840..74284738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006495958.2XP_006496021.1  

    Conserved Domains (3) summary
    smart00320
    Location:384422
    WD40; WD40 repeats
    COG2319
    Location:84425
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:81381
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. XM_006495957.2XP_006496020.1  

    Conserved Domains (3) summary
    smart00320
    Location:385423
    WD40; WD40 repeats
    COG2319
    Location:85426
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:82382
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate Mm_Celera

Genomic

  1. AC_000023.1 Alternate Mm_Celera

    Range
    74841193..74846091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)